Gene Sked_21220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21220 
Symbol 
ID8633757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2367082 
End bp2367621 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content73% 
IMG OID 
ProductProtein of unknown function (DUF664) 
Protein accessionYP_003314876 
Protein GI269795421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.087402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG TCGACGAGCA GGGCCGCCCT GAACCACCGC TGGCCGGGGA CGAGGTGTCG 
ACGCTCCTCG GTTTCCTCGA CTTCCACCGG GCGACGCTCG CGTGGAAGTG CGCCGGTCTC
GACGCCGAGG CGCTCGCCAC GACCGTCGGC GTGTCGACCA TGACCCTCGG CGGCCTGCTC
AAGCACCTCG CCTACGTGGA GGACGACTGG TCGGTGCGCT GGCTCCGCGG CGAGGAGCGG
TGCGCCCCGT GGGACGACGT CGACTGGACG GTAGAACCCG ACTGGGACTG GACGTCTGCG
GCGCAGGACT CCCCCGACGA GCTGCACTCG CTCTGGGATG CCGCGACCCA GCGGTCGCGG
ACAGCCGTGG CCGAGGCCCT CGCGGACGGC GGTCTGGAGA CGCTCGCACG GCGACCGTTC
GCCGACGGAC GCACCGCGAG CCTGCGCTGG GTCCTCGTCC ACCTCGTCGA GGAGTACGCG
CGCCACAACG GCCATGCCGA CCTGCTGCGC GAGGCCGTCG ACGGGACGAC CGGCGAGTAG
 
Protein sequence
MTDVDEQGRP EPPLAGDEVS TLLGFLDFHR ATLAWKCAGL DAEALATTVG VSTMTLGGLL 
KHLAYVEDDW SVRWLRGEER CAPWDDVDWT VEPDWDWTSA AQDSPDELHS LWDAATQRSR
TAVAEALADG GLETLARRPF ADGRTASLRW VLVHLVEEYA RHNGHADLLR EAVDGTTGE