Gene Sked_21070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21070 
Symbol 
ID8633742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2351431 
End bp2355360 
Gene Length3930 bp 
Protein Length1309 aa 
Translation table11 
GC content75% 
IMG OID 
Productamino acid adenylation enzyme/thioester reductase family protein 
Protein accessionYP_003314863 
Protein GI269795408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.642428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.678739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC CCACCACCCC GGGCCAGCCT GCGACAGGCC CCTCCTCGCT GCTGCGCGGC 
GACCTCGCGG CGCCAGAGCG CACGCTCGTC GACGTGTTCG GCGAGACGGT CGACCGGTAC
CCGGACTCCC CCGCCCTCGA CAACGTGGCC GAGGTGCTCA CCTACGCGGC GCTCGACGAG
GCGACCGACG AGCTCGCCGG CGAGCTGGTC GGTCTCGGGG TGGGCCCGGG CGACACGGTC
GGCGTGCGGA TCAGCTCGGG GACGACGGCG CTGTACGTCG CGATCCTCGC GATCCTCAAG
GCGGGGGCGG CGTACGTGCC GGTCGACAAG GACGACCCCG ACGAGCGGGC CCGCACGGTG
TTCGACGAGG CGCGCGTCGC GGCAGTGGTC GGCGACGGCC TGGTGGTCGC CGAGCGCGGT
CCGCGGGCCT CTGCCAGGTC CGACCGCCAC GACGGCCCGA CGCCGTCGGA CGACGCGTGG
GTCATCTTCA CGTCCGGCTC GACCGGGACC CCCAAGGGCG TCGCGGTCTC GCACCGCTCC
GCGGCCGCCT TCGTGGACGC CGAGGCGCGG CTGTTCCTCC AGGACCGTCC CCTCGGCCCG
GGCGACCGGG TCATGGCGGG GCTGTCGGTC GCCTTCGACG CGTCGTGCGA GGAGATGTGG
CTCGCGTGGC GCCACGGTGC GTGCCTGGTG CCGGCGCCGC GGTCGCTCGT CAAGAGCGGC
ATGGACCTCG GCCCGTGGAT GACGGCCAAC GACGTCACCG TCGTCTCGAC GGTGCCGACG
CTCGTCGCCC TGTGGCCCCC GACGGCGCTC GACGGCGTAC GTCTGCTGAT CCTCGGCGGC
GAGGCGTGCC CGCCCGAGAT CGGTGCGCGG CTCGCGACCG CGGACCGTGA GCTGTGGAAC
ACCTACGGGC CGACCGAGGC AACGGTCGTG GCCTGCGCGG CGCGGCTGAC GACGGAGCCG
CCCGTGCGGA TCGGGACGGC GCTCGACGGC TGGGACCTCG CTGTGGTCGA CGCGCAGGGC
CAGCAGGTCG CCGACGGCGA GACCGGCGAG CTGATCATCG GCGGCGTCGG GCTGGCCCGG
TACCTGGACC CGGTCAAGGA CGCCGAGAAG TACGCACCGA TGCCGTCGCT CGGCTGGGAG
CGCGCCTACA GGTCGGGCGA CCTCGTAGTC AACGACCCGG AGGGTCTGCT GTTCGTGGGG
CGCGCGGACG ACCAGATCAA GATCGGCGGG CGCCGGGTCG AGCTCGGCGA GGTCGACAGC
GCGCTCCTGG CCCTCCCGGG GGTCGAGGCT GCTGCGGCCG CCGTCCGGAA GACCCGGTCC
GGCAACACGA TCCTCGTCGG GTACCTCACC CCCGGTCCTG GCTTCGACCT GACGAGTGCG
ATGGCCACGC TCCGGGCCAC CATGCCCTCG GCGCTGGTCC CGCGGATCGC GCAGCTGGAC
ACCCTGCCGA CCCGCACCTC GGGGAAGATC GACCGCGACG CCCTGCCGTG GCCGCTGCCG
AGCGCGGGAG CCGAGCCTGC CGCGGAGACG CTCGACGGGA CCGCGGGCTG GGTCCAGGAG
CTCTGGCTGC AGATCCTCGG GGCCGTCGTC ACCTCGACCT CCGACGACTT CTTCGCGCTC
GGGGGCGGCA GCCTCACCGC CGCTCAGCTC GTGTCACAGC TGCGCGGGCA GTTCCCCGAG
GTGACCGTCG CCGACGTGTA CGAGAACCCG TCGGTCGGCG CCCTGGCTGC CGCGCTCGAC
GGCATGGCCG CGCCCACCGG CCTGCGCAAC ACCGAGGTCA ACCCGGTGCC GACCGCGACC
CAGGCCGCGC AGGTCCTCGC GTCGGTGCCG CTGCGCACCG TCGCGGGGCT GCGGTGGCTC
GTGTGGCTCG CGGCCGTGAG CACGGTGGTG GGCGACATGT TCTCCGTCAC CTGGCTTCCG
CAGGCCTCGT GGTGGTGGAT CGGGCTCGGG GCTGTGCTGC TGGTGCTGCC GGCGGGCCGG
ATGGCGCTCG CCGCGCTCGG CGCCCGCCTC CTGCTGCGCG GTGTCGTCCC GGGACGCTAC
CCGCGCGGCG GTCGGGTGCA CCTGCGGCTG TGGCTCGCCG AGCGCCTCGC CGACGAGCTC
GGTGCGACGT CCCTCGCCGG TGCCACCTGG ATGACCACCT ACGCCCGGAT GCTCGGCGCG
CGGGTCGGCG CGGACGTCGA CCTGCACACG ATCCCGCCGA TCACCGGGAT GCTCACGCTC
GGCGACGGCT GCTCGGTAGA GCCCGAGGTC GACCTCGTCG GGCACTGGCT CGACGGCGAC
GTGCTGCACG TCGGCGCGAT CACCGTCGGC GAGCGGGCCC GGATCGGTGC CCGCACGACG
CTCGTCGGTG GCGCGGTCGT GGGCGACCGC GCCGAGGTGG CACCGGGGTC CGCGGTCCTC
GGGACGGTCC CGGTCGACGC CGCGTGGGCC GGGGCGCCCG CGCAGCGCAC GGGTGACGCC
CGCGGCCCGT GGGAGCAGGA CCGTCCGCCC CGGCGTCGCC GCTGGGTGTG GGCCTACGCG
GCCACCGCCG TCGCGATCAG CGGCCTGCCC GTGGTCGCGG TCGCGTGCGC CCTCGCCGTG
GTGATCGGCC CGGTCGCCGA CGCAGGCTCG GCCGGCGGTG CCGCGCTGCG GGCTCTCGTG
CTCCTGCCCG TGGCCTGCGT GGTCGGGCTC GTGGTCCTCG CGGCGCTCGT GTGGGCCTGC
GTGCGGCTGC TCTCGCGCGG GCTCACGAGC GGCATCCATG CCGTGCACGG ACCGGGCGCG
TGGCGCGCCT GGGCGGTCCT GCGGATCTTG GACGAGGCGC GCACCTGGCT GTTCCCCCTG
TACTCGAGCT CGCTCACGCC GGCGTGGCTG CGGGCGCTCG GGGCAGACGT CGGCGAGGAC
GTCGAGGCCT CGACGGTCCT GCTCATCCCG AGCCTGACCA CCGTCAACGA CGGAGCGTTC
CTCGCCGACG ACACGATGCT GGGCATGTAC GAGCTCGGCA GCGGGTGGCT GCGCGTCGAG
CAGGTGAAGA TCGGCAAGCA CGCCTTCGTC GGGAACTCCG GGATGGCGGC GCCGGGACGC
AAGGTCCCCA AGGGCGGGCT CGTCGCGGTG CTCTCGGCGG CGCCGCGACG CACCAAGGCC
AAGGGCGGCA CGTCGTGGCT GGGCAGCCCG CCGACGCGGC TGCGCAGGAC CGCGAGCGAC
GTCGACCAGA GCCGGACCTA CGACCCGCCG ACGCGGCTGC GGGTGGCCCG TGCGCTCGTC
GAGGTCTGCC GGCTCGTCCC CGTGATGGTC GCCGCGTCGC TGAGCCTCGG GGTCGTCACG
GTGCTCGTCG CGGTCGCCGG CTCGCACGGC TGGGGGGCCG CCGCGCTCGT GTCAGGTCTC
GTGCTGCTCG TCGCCGGTGC GCTCGCCGCC GCCGTGACCA CTGCTGCCAA GTGGGCGCTC
GTGGGCCGGG TCACGGCGAC CGACCACGCG CTGTGGAGCT CCTTCGTGTG GCGCAACGAG
CTCGCGGACA CCTTCGTCGA GGTGGTCGCC GCCCCGTGGT TCGCGCGGGG CACGCTCGGC
ACGCCGGTGC TCGCCGTGTG GCTGCGATCC CTCGGCGCAC GCGTCGGCCG CGGTGTGTGG
TGCGACACGT ACTGGCTGCC CGAGGCCGAC CTCGTCGAGC TGCGCGACGG CGTGACCGTC
AACCGCGGTT GCGTGGTGCA GACGCACCTG TTCCACGACC GGGTCCTCAG CCTCGACGCC
GTCGTGCTCA AGCAGGGCGC GACCCTCGGA CCAGGGAGCG TCGTGCTCCC CGCTGCGACT
CTCGGCAGGC ACGCTACTGT GGGCCCGGTG TCCCTGGTCA TGAGAGGTGA GTCAGTGCCC
GACAAGACCC GCTGGGTCGG CAACCCGATC GGCCCCTGGG TCGACGAGGA AGCCCCGACG
CCCTCCCCGG CAGAGCCGGT GACCGCGTGA
 
Protein sequence
MTVPTTPGQP ATGPSSLLRG DLAAPERTLV DVFGETVDRY PDSPALDNVA EVLTYAALDE 
ATDELAGELV GLGVGPGDTV GVRISSGTTA LYVAILAILK AGAAYVPVDK DDPDERARTV
FDEARVAAVV GDGLVVAERG PRASARSDRH DGPTPSDDAW VIFTSGSTGT PKGVAVSHRS
AAAFVDAEAR LFLQDRPLGP GDRVMAGLSV AFDASCEEMW LAWRHGACLV PAPRSLVKSG
MDLGPWMTAN DVTVVSTVPT LVALWPPTAL DGVRLLILGG EACPPEIGAR LATADRELWN
TYGPTEATVV ACAARLTTEP PVRIGTALDG WDLAVVDAQG QQVADGETGE LIIGGVGLAR
YLDPVKDAEK YAPMPSLGWE RAYRSGDLVV NDPEGLLFVG RADDQIKIGG RRVELGEVDS
ALLALPGVEA AAAAVRKTRS GNTILVGYLT PGPGFDLTSA MATLRATMPS ALVPRIAQLD
TLPTRTSGKI DRDALPWPLP SAGAEPAAET LDGTAGWVQE LWLQILGAVV TSTSDDFFAL
GGGSLTAAQL VSQLRGQFPE VTVADVYENP SVGALAAALD GMAAPTGLRN TEVNPVPTAT
QAAQVLASVP LRTVAGLRWL VWLAAVSTVV GDMFSVTWLP QASWWWIGLG AVLLVLPAGR
MALAALGARL LLRGVVPGRY PRGGRVHLRL WLAERLADEL GATSLAGATW MTTYARMLGA
RVGADVDLHT IPPITGMLTL GDGCSVEPEV DLVGHWLDGD VLHVGAITVG ERARIGARTT
LVGGAVVGDR AEVAPGSAVL GTVPVDAAWA GAPAQRTGDA RGPWEQDRPP RRRRWVWAYA
ATAVAISGLP VVAVACALAV VIGPVADAGS AGGAALRALV LLPVACVVGL VVLAALVWAC
VRLLSRGLTS GIHAVHGPGA WRAWAVLRIL DEARTWLFPL YSSSLTPAWL RALGADVGED
VEASTVLLIP SLTTVNDGAF LADDTMLGMY ELGSGWLRVE QVKIGKHAFV GNSGMAAPGR
KVPKGGLVAV LSAAPRRTKA KGGTSWLGSP PTRLRRTASD VDQSRTYDPP TRLRVARALV
EVCRLVPVMV AASLSLGVVT VLVAVAGSHG WGAAALVSGL VLLVAGALAA AVTTAAKWAL
VGRVTATDHA LWSSFVWRNE LADTFVEVVA APWFARGTLG TPVLAVWLRS LGARVGRGVW
CDTYWLPEAD LVELRDGVTV NRGCVVQTHL FHDRVLSLDA VVLKQGATLG PGSVVLPAAT
LGRHATVGPV SLVMRGESVP DKTRWVGNPI GPWVDEEAPT PSPAEPVTA