| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21040 |
|---|
| Symbol | |
|---|
| ID | 8633739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2346530 |
|---|
| End bp | 2348629 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | peptidyl-dipeptidase Dcp |
|---|
| Protein accession | YP_003314860 |
|---|
| Protein GI | 269795405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.547895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.690567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT CTTCCCACGA GCTCGACGCG AGCAACCCCT TCGCGAGCCG GTCCACCCTT
CCCTACGCCC TGCCCGACTT CTCGGCGATC CGCGACGAGC ACTACATCCC GGCGGTGCGC
GCCGGGATGG CCGCGGAGCT CGCCGAGATC GAGGCGATCG TCACCGACCC GAACCCGCCG
ACCGTCGAGA ACACCCTCGA GGCGCTCGAG ACGAGCGGTG AGGTGCTCGA CCGAGCCCTC
ACCGTCCTCT ACAACGTCGC CTCGGCCGAC GCGAGCCCTG CGCTCGAGGA CATCGAGGAG
ACGCTCGCCC CCGAGCTCTC GGCGCACCAC GACACCATCT ACATGGACGC GCGCCTCTAC
GCCCGCGTCG TCGCCCTCGA CACCGCGGTC CGCGCGGGCG AGGTCGAGGC CGGTGACGAC
ACCCGCTGGC TGCTCGAGAA CCTCCTCCAG GACTTCCGCC GCTCGGGCAT CGACCTGAGC
GCCGAGGACC AGGCGACGCT CCGCGACCTC AACGCGCGCA CCACGTCGCT GGAGGCGGCC
TTCGGGCGGC GCCTCCTGGC CGGTGCGAAC GCGGCGAGCG TCTTCGTCGA CGACGTCGCC
GACCTCGAGG GCCTCGCCGA CGACGCGATC GCGGCAGCCG CGCAGGCCGC CGCCGATCGC
GGCGAGGAGG GGCGCTACCT CCTCGAGATG CAGCTGCCGA CGCAGCAGAC CGTGCTCGCC
TCGCTCGCCC GTCGTGACGT GCGCCGCCGG GTGCACGAGG CCTCGGTGAC GCGCGGGGCG
ACCGGTGACG ACACCGACAC CCGCGAGATC GTCGTCGAGC TCGCCCGGCT GCGGGCCGAG
CACGCCCGCC TGCTCGGCTA CGACCACCAC GCGGCGTACA TCGCCGAGGA CGCCACCGCC
AAGACGACCG AGGCCGTGAA CGCGATGCTC GCCCCGCTGG CCCCGGCCGC GGCCGCGAAC
GCCCGCAAGG AGGCCCTCGA CCTCACCGAG GCGCTCGTCG CCGACCTCGG CGACCCGGGC
GCGACGCTCG AGGCCTGGGA CTGGGCCTAC TACGCCGAGC GTGTCCGCAA GCAGCGCTAC
TCCCTCGACG ACGCCCTGCT CCGCCCGTAC CTCGAGCTCG AGAAGGTCGT CCAGGACGGC
GTCTTCAAGG CCGCCACCAA GCTCTACGGC ATCACCTTCT CCGAGCGCAC CGACCTCGTG
GGCTACCACC CCGACGTGCG GGTCTTCGAG GTCTTCGACA CCGACGGCGC CGGCATGGGC
CTGTTCCTCG CCGACTACTA CACGCGCGAG TCCAAGCGCG GCGGCGCGTG GATGAACAAC
CTCGTCGACC AGAGCTACCT CACCGGTGAG CTGCCGGTCG TGGTCAACAA CCTGAACATC
GTCAAGCCGC CGGCGGGGGA GCCCACGCTG CTCGTCTTCG ACGAGGTCAT CACGCTCTTC
CACGAGTTCG GCCACGCGCT GCACGGGCTC TTCTCCGCCG TCCGGTACCC CTCGCACTCG
GGCACCGACG TGCCGCGCGA CTTCGTCGAG TACCCCTCGC AGGTCAACGA GATGTGGGCG
TGGGACGAGT CGATCCTGCG CTCCTACGCG GTCCACCACG TCACGGGCGA GCCGCTCCCG
GAGCAGTGGG TGCGCACCAT GCTCGACTCC CGCCTGTTCA ACGAGGGCTT CGCGACGACC
GAGTACCTCG CCGCGACGCT CCTCGACCAG GCCTGGCACC AGGTGACCCC GGAGCAGGTC
CCGAGCTCCG TGGACGAGGT CCTGCCCTTC GAGGCGGCCG CTCTCGAGGC CGCCGGCGTC
GCGCTCTCCG AGGTCCCGGC CCGCTACCGC ACCACGTACT TCAACCACGT GTTCGGCGGT
GGCTACTCGG CCGGCTACTA CTCGTACATC TGGTCCGAGG TGCTCGACGC GGAGACCGTC
GAGTGGTTCC GCGAGAACGC CGACGCCGAC GGCCGGGTCC TCAACCGCGC CTCGGGCGAC
CGCTTCCGCG CCGCGCTGCT GTCCCGCGGA GGGTCGACCG ACCCGATGCA GGCCTTCGGC
GAGCTGCGCG GGCGGGCGCC CGAGATCGCC CCGCTGCTGG CCCGCCGCGG CCTCGTCTGA
|
|---|
| Protein sequence | MSDSSHELDA SNPFASRSTL PYALPDFSAI RDEHYIPAVR AGMAAELAEI EAIVTDPNPP
TVENTLEALE TSGEVLDRAL TVLYNVASAD ASPALEDIEE TLAPELSAHH DTIYMDARLY
ARVVALDTAV RAGEVEAGDD TRWLLENLLQ DFRRSGIDLS AEDQATLRDL NARTTSLEAA
FGRRLLAGAN AASVFVDDVA DLEGLADDAI AAAAQAAADR GEEGRYLLEM QLPTQQTVLA
SLARRDVRRR VHEASVTRGA TGDDTDTREI VVELARLRAE HARLLGYDHH AAYIAEDATA
KTTEAVNAML APLAPAAAAN ARKEALDLTE ALVADLGDPG ATLEAWDWAY YAERVRKQRY
SLDDALLRPY LELEKVVQDG VFKAATKLYG ITFSERTDLV GYHPDVRVFE VFDTDGAGMG
LFLADYYTRE SKRGGAWMNN LVDQSYLTGE LPVVVNNLNI VKPPAGEPTL LVFDEVITLF
HEFGHALHGL FSAVRYPSHS GTDVPRDFVE YPSQVNEMWA WDESILRSYA VHHVTGEPLP
EQWVRTMLDS RLFNEGFATT EYLAATLLDQ AWHQVTPEQV PSSVDEVLPF EAAALEAAGV
ALSEVPARYR TTYFNHVFGG GYSAGYYSYI WSEVLDAETV EWFRENADAD GRVLNRASGD
RFRAALLSRG GSTDPMQAFG ELRGRAPEIA PLLARRGLV
|
|---|
| |