Gene Sked_20950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20950 
Symbol 
ID8633730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2337660 
End bp2338580 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID 
Productuncharacterized protein (ATP-grasp superfamily) 
Protein accessionYP_003314851 
Protein GI269795396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.344012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.641113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AGACCCCTTC AGACGTGACC GACGCCGCGG GCGGCTCGGG CGAGACGACC 
CCGGCCGTGG AGGCCGTGGT CGCCGACGCC GAGAGTCCCG CCGAGGACGC GATCATGTTC
GCGGCCTTCG AGGGGTGGAA CGACGCGGGC AGCGCGGCGA GCTCCGCGCT GCTGCACCTC
ATCGACGTGT GGGGCGCCGA GAAGATCGAC GAGCTCGACC CGGAGGAGTA CCACGACTTC
CAGGAGAACC GGCCGATGGT CTCCACAGCC CCCGACGGCA CCCGGCACCT CGCCTGGCCC
ACCACGACCA TCTCGGTCGT CGAGCCTCCG CGCACCCGCC GCCGCGTGGT CCTCGTGCAC
GGCATCGAGC CGTCGCTGCG CTGGAAGTCG TACTGCACGG AGATCCTCGA GATCGCCCAG
AGCCTCGGCG TGACGACCGT TGTGACCCTC GGCGCGCTGC TGGCCGACGT GCCGCACACC
CGGCCGATCC CCGTCTCGGT CACCTCGGAC GACCCCGCGG TCCAGCACCT GCTCGACGTC
GAGGCCAACA CCTACGAGGG TCCGACCGGC ATCGTCGGCG TCCTGCACAG CGCGGCCCAC
GAGGCCGGCT TCCACTCGCT GAGCGTCTGG GCCGCCGTCC CGCACTACGT CGCGCACCCG
CCCTCGCCCA AGGCCACCGT CGCGATCCTC AGCCGTCTCG AGGCCTTCCT CGCCGAGCCC
GTGGACCTCA AGGACCTCCC CGACGACGCC GAGGCCTGGC AGAACGGTGT CGACAAGCTC
ACCGCAGAGG ACTCCGAGAT CGCCGAGTAC GTCACCCAGC TCGAGGAGGC GAAGGACACC
GCCGACCTCC CGGAGGCGAG CGGCGAGGCC ATCGCGCGCG AGTTCGAGCA GTACCTCAAG
CGACGGGACA AGGACTTCTA G
 
Protein sequence
MTDETPSDVT DAAGGSGETT PAVEAVVADA ESPAEDAIMF AAFEGWNDAG SAASSALLHL 
IDVWGAEKID ELDPEEYHDF QENRPMVSTA PDGTRHLAWP TTTISVVEPP RTRRRVVLVH
GIEPSLRWKS YCTEILEIAQ SLGVTTVVTL GALLADVPHT RPIPVSVTSD DPAVQHLLDV
EANTYEGPTG IVGVLHSAAH EAGFHSLSVW AAVPHYVAHP PSPKATVAIL SRLEAFLAEP
VDLKDLPDDA EAWQNGVDKL TAEDSEIAEY VTQLEEAKDT ADLPEASGEA IAREFEQYLK
RRDKDF