Gene Sked_20870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20870 
Symbol 
ID8633722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2328834 
End bp2329691 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID 
Productproteasome endopeptidase complex, beta component 
Protein accessionYP_003314843 
Protein GI269795388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTG AGCACCCAGC ACGGCTCCCG CAGGCCTTCA TGACCCCGGG AAGCTCGTCC 
TTCGTCGACT TCCTGGCGGC GCACGACCCC TCGCTGCTGC CCTCGTCGCG GGCGCTGCCC
GCCGGCTCGG CGCCGCCGGC ACCGCACGGC ACGACCATCG TCGCGGCGAC CTTCGACGGC
GGCGTGGTCG TGGCGGGGGA CCGCCGCGCG ACCTCGGGCT CGATGATCGC GCACCGCGAG
ATCGAGAAGG TCTTCGCCGC GGACGAGTTC TCGGCCGTGG GCATCGCCGG GACCGCCGGT
CTGGCCCTCG AGCTCGTCCG GCTGTTCCAG CTCGAGCTCG AGCACTACGA GAAGATCGAG
GGCACCCTGC TGTCCCTCGA CGGCAAGGCG AACCGCCTGT CCACGATGAT CCGCGGCAAC
CTCGGCCTCG CGATGCAGGG GCTCGCCGTG GTGCCGCTGT TCGCGGGCTT CGACCTGGTC
GAGCGCCGCG GGCGGATCTT CTCCTACGAC GTCACCGGCG GCCGTTACGA GGAGCTCGAC
CACCACAGCG TCGGCTCCGG CTCGGTGTTC GCGCGCGGCG CGCTGAAGAA GCTCTGGCGC
CCCGGCCTCG ACGCGGAGGC CGCGGTCCGG GTGGTCGTCG AGGCGCTGTT CGACGCGGCC
GACGACGACT CGGCGACGGG CGGACCCGAC GCCGTCCGGC AGATCTGGCC CGTCGTCGCG
ACCGTCAGCG AGGCCGGCTA CCTGCGTCAG GGCGACGACG CCCTCGAGAG CGTCGTCGAG
GACATCTCGC TCGAGCGGAC CCGGCAGGCC CGCTCCTCCC GCTCGCGCCA CGGATCGCTC
GGAGGTGACC TGCGATGA
 
Protein sequence
MTAEHPARLP QAFMTPGSSS FVDFLAAHDP SLLPSSRALP AGSAPPAPHG TTIVAATFDG 
GVVVAGDRRA TSGSMIAHRE IEKVFAADEF SAVGIAGTAG LALELVRLFQ LELEHYEKIE
GTLLSLDGKA NRLSTMIRGN LGLAMQGLAV VPLFAGFDLV ERRGRIFSYD VTGGRYEELD
HHSVGSGSVF ARGALKKLWR PGLDAEAAVR VVVEALFDAA DDDSATGGPD AVRQIWPVVA
TVSEAGYLRQ GDDALESVVE DISLERTRQA RSSRSRHGSL GGDLR