Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_20830 |
Symbol | |
ID | 8633718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2324840 |
End bp | 2325613 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | imidazole glycerol phosphate synthase subunit hisF |
Protein accession | YP_003314839 |
Protein GI | 269795384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.288387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCT CGGTCCGCGT CATCCCGTGC CTCGACGTCG ACGCAGGTCG CGTGGTCAAG GGCGTCAACT TCGAGAACCT CCGCGACGCC GGCGACCCCG TCGAGCTCGC GCGGACCTAC GACGCGGCGG GTGCCGACGA GCTGACCTTC CTCGACGTCT CGGCGTCCTC GGGCAACCGC GAGACCACCT ACGACGTGGT CCGTCGGACG GCCGAGGAGG TCTTCATCCC GCTGACCGTC GGGGGCGGCG TCCGGACCGT CGAGGACGTC GACCGCCTGC TGCGGGCCGG CGCGGACAAG GTCGGGGTCA ACACCGCGGC GATCGCGCGG CCCGAGCTCA TCGCCGAGAT CGCCGACCGC TTCGGCAGCC AGGTCCTCGT GCTCTCGGTC GACGCCCGCC GCGTGCGTGA CGACGTCCGG ACCGACTCGG GCTTCGAGGT CACCACGCAC GGCGGACGGC GGGGGACCGG CATCGACGCC GTCGAGTGGG CGGCGCGTGC CGCCGCCCTC GGCGCCGGCG AGATCCTGCT CAACTCCATG GACGCCGACG GCACCTACGA CGGCTACGAC CTCGAGATGT TCGCCCAGGT GCGCGCCGAG GTGACGGTGC CGATGGTCGC GAGCGGTGGC GCGAGCTCGC CGGCAGACTT CACCGCTGCG GCCCGGGCCG GCGCGGATGC CGTGCTCGCG GCGAGCGTCT TCCACTTCGG GCGCCTGACG ATCGACGAGG TCAAGCGGGC GATGGCCGCC GACGGCGTGC CGGTCCGCCT CTAG
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Protein sequence | MSVSVRVIPC LDVDAGRVVK GVNFENLRDA GDPVELARTY DAAGADELTF LDVSASSGNR ETTYDVVRRT AEEVFIPLTV GGGVRTVEDV DRLLRAGADK VGVNTAAIAR PELIAEIADR FGSQVLVLSV DARRVRDDVR TDSGFEVTTH GGRRGTGIDA VEWAARAAAL GAGEILLNSM DADGTYDGYD LEMFAQVRAE VTVPMVASGG ASSPADFTAA ARAGADAVLA ASVFHFGRLT IDEVKRAMAA DGVPVRL
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