Gene Sked_20830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20830 
Symbol 
ID8633718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2324840 
End bp2325613 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID 
Productimidazole glycerol phosphate synthase subunit hisF 
Protein accessionYP_003314839 
Protein GI269795384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.288387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCT CGGTCCGCGT CATCCCGTGC CTCGACGTCG ACGCAGGTCG CGTGGTCAAG 
GGCGTCAACT TCGAGAACCT CCGCGACGCC GGCGACCCCG TCGAGCTCGC GCGGACCTAC
GACGCGGCGG GTGCCGACGA GCTGACCTTC CTCGACGTCT CGGCGTCCTC GGGCAACCGC
GAGACCACCT ACGACGTGGT CCGTCGGACG GCCGAGGAGG TCTTCATCCC GCTGACCGTC
GGGGGCGGCG TCCGGACCGT CGAGGACGTC GACCGCCTGC TGCGGGCCGG CGCGGACAAG
GTCGGGGTCA ACACCGCGGC GATCGCGCGG CCCGAGCTCA TCGCCGAGAT CGCCGACCGC
TTCGGCAGCC AGGTCCTCGT GCTCTCGGTC GACGCCCGCC GCGTGCGTGA CGACGTCCGG
ACCGACTCGG GCTTCGAGGT CACCACGCAC GGCGGACGGC GGGGGACCGG CATCGACGCC
GTCGAGTGGG CGGCGCGTGC CGCCGCCCTC GGCGCCGGCG AGATCCTGCT CAACTCCATG
GACGCCGACG GCACCTACGA CGGCTACGAC CTCGAGATGT TCGCCCAGGT GCGCGCCGAG
GTGACGGTGC CGATGGTCGC GAGCGGTGGC GCGAGCTCGC CGGCAGACTT CACCGCTGCG
GCCCGGGCCG GCGCGGATGC CGTGCTCGCG GCGAGCGTCT TCCACTTCGG GCGCCTGACG
ATCGACGAGG TCAAGCGGGC GATGGCCGCC GACGGCGTGC CGGTCCGCCT CTAG
 
Protein sequence
MSVSVRVIPC LDVDAGRVVK GVNFENLRDA GDPVELARTY DAAGADELTF LDVSASSGNR 
ETTYDVVRRT AEEVFIPLTV GGGVRTVEDV DRLLRAGADK VGVNTAAIAR PELIAEIADR
FGSQVLVLSV DARRVRDDVR TDSGFEVTTH GGRRGTGIDA VEWAARAAAL GAGEILLNSM
DADGTYDGYD LEMFAQVRAE VTVPMVASGG ASSPADFTAA ARAGADAVLA ASVFHFGRLT
IDEVKRAMAA DGVPVRL