Gene Sked_20750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20750 
Symbol 
ID8633710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2316081 
End bp2316893 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content74% 
IMG OID 
Productindole-3-glycerol phosphate synthase 
Protein accessionYP_003314831 
Protein GI269795376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.600467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.621032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC TCGACGACAT CATCGCCGGG GTGCGTGAAG ACCTCGCGGT GCGCGAGGCG 
GCCACGCCGC TCTCGGTGCT CAAGGAGAAG GCCCAGCGCC AGACGAACGC CCTCGAGTGC
GTCAGCCGCC TCAGCGGCGA GGACGCCGTG GCCGTGATCG CCGAGGTGAA GCGCTCGAGC
CCGAGCAAGG GTGCGCTCGC CTCGATCGAC GACCCTGCGG CGCTCGCCCG CGAGTACGAG
AAGGGCGGCG CGTCCGTCAT CTCGGTGCTC ACCGAGCAGC GGCGCTTCGG CGGCAGCCTG
GACGACCTGC GCGCGGTCCG CGCGGCGGTC GACATCCCCG TGCTCCGCAA GGACTTCGTG
GTCACGCCCT ACCAGGTGTG GGAGGCCCGC GCCTGGGGCG CCGACCTCGT GCTGCTCATC
GTCGCGGCCC TCGAGCAGAC CGTGCTCGAG TCGCTCCTCG ACCGCGTGCA CTCGCTCGGC
ATGACGGCCC TCGTCGAGGT GCACACCGTC GACGAGGTGA CCCGCGCGGT CGACGCCGGG
GCGCGCCTCG TCGGCGTCAA CGCCCGCAAC CTCAAGACCC TCGAGGTCGA CCGCACGACC
TTCGCGCGTC TCGCCCCGGC GGTCCCCGAG GGGATCGTGC GGATCGCCGA GTCGGGTGTC
CGCGGCCCCC ACGACGTCAT GGACTACGCC CGCTCCGGCG CGCACGCCGT GCTCGTCGGC
GAGGCGCTCG TGACGGGGGA GTCCCCGCGC TCCTCGGTCG CCGACCTGGT CGCCGCCGGG
TCCCACCCCT CGCTCCGGGC AGTCCGCCAC TAG
 
Protein sequence
MTVLDDIIAG VREDLAVREA ATPLSVLKEK AQRQTNALEC VSRLSGEDAV AVIAEVKRSS 
PSKGALASID DPAALAREYE KGGASVISVL TEQRRFGGSL DDLRAVRAAV DIPVLRKDFV
VTPYQVWEAR AWGADLVLLI VAALEQTVLE SLLDRVHSLG MTALVEVHTV DEVTRAVDAG
ARLVGVNARN LKTLEVDRTT FARLAPAVPE GIVRIAESGV RGPHDVMDYA RSGAHAVLVG
EALVTGESPR SSVADLVAAG SHPSLRAVRH