Gene Sked_20720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20720 
Symbol 
ID8633707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2312884 
End bp2313861 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_003314828 
Protein GI269795373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.14446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.252754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC TGCTCGCCCA GGGGGCCGTC TACGCGTCGA TCCCCAGCCC GAGCACCGGG 
GTGTGGCACC TCGGCCCGCT GCCGCTGCGC GCCTACGCCT TCGCGATCCT CCTCGGGATC
TTCGTCGCCT TCTGGATGAC CAGCAAGCGC TGGGAGGCTC GCGGCGGCTC GGTCGACGAC
ATGTACACGA TCGTCTACTG GGCGGTGCCC TTCGGCATCA TCGGTGGCCG GATCTACCAC
GTCTTCAGCT CGCCGGCCGC GTACTTCGGC GAGGGCGGAG ACCCGCTCAA GGCCTTCGCG
ATCTGGGAGG GCGGCCTCGG CATCTGGGGC GCGATCGCCT TCGGCGCCGT CGGCGCCTAC
ATCGGGTGCC GCCGCACCGG CGTGAGGTTC TCGTCCTTCG CGGACGCCGT CGCCCCGGGC
CTGCTCGTCG CCCAGGCGAT CGGGCGGCTG GGGAACTGGT TCAACCAGGA GCTCTTCGGC
GGGCCGACCA CGCTCCCGTG GGGCCTCGAG ATCAGCCCGG AGCGCATCCC CGCGGGCTTC
CCGGCCGGCA CGCTGTTCCA CCCGACCTTC CTCTACGAGA TGCTGTGGAA CCTCGCCGCC
GCAGCCCTGC TCGTGTTCCT GGACAGGCGG TTCAGGCTCG GTCGCGGGCG CGTATTCTGG
TTGTACGTCG TCTTCTACAC GGCCGGTCGC CTCTGGATCG AGCTCCTGCG GATCGACCCT
GCGGAGCAGG TGCTGGGGCT TCGCCTCAAC GTCTGGACCT CGATCATCGT CGGGCTCGTC
GGTGTGGCAG CCTTCGTGCT GCAGGGCCGC CGGCACTCCG GCCGCGAGGA CTCGGTCTTC
GTGCCGGGCC ACGAGCCCGC GGTCGTGCCA GCCGGCGCGG CAGCAGAAGA CGCACCAGAC
GTCGTGACCG ACCACCCCAC CGGTCACGAC GAGTCGACGG ACACCGCCGA CGAAGGTCAA
GACCAGCCCA AGATGTGA
 
Protein sequence
MSALLAQGAV YASIPSPSTG VWHLGPLPLR AYAFAILLGI FVAFWMTSKR WEARGGSVDD 
MYTIVYWAVP FGIIGGRIYH VFSSPAAYFG EGGDPLKAFA IWEGGLGIWG AIAFGAVGAY
IGCRRTGVRF SSFADAVAPG LLVAQAIGRL GNWFNQELFG GPTTLPWGLE ISPERIPAGF
PAGTLFHPTF LYEMLWNLAA AALLVFLDRR FRLGRGRVFW LYVVFYTAGR LWIELLRIDP
AEQVLGLRLN VWTSIIVGLV GVAAFVLQGR RHSGREDSVF VPGHEPAVVP AGAAAEDAPD
VVTDHPTGHD ESTDTADEGQ DQPKM