Gene Sked_20630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20630 
Symbol 
ID8633698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2300379 
End bp2301380 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type branched-chain amino acid transport systems, ATPase component 
Protein accessionYP_003314819 
Protein GI269795364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC ACGAGCCCGG TGGTGTCGGC GCCGGCGCCG AGCACGGCGA GGAGTTCCGC 
GGGACCGAGC AGGACGTCGC CGAGGCCACC CCCGAGAAGG ACCTGCCCGG CGGCGGCGTC
GAGGAGCCCG TGGTCGTCGA CGTCGCCGAC GTCCACCCCG AGCTCGCCGA CCCCGAGGTC
GTGGCCGAGA AGGTCGCCTC CGACCGGGAG GTGCACGCGG CCGTCGGCGA GCCGCTGCTG
CGGATGGAGG ACGTCACCGT CCAGTTCGGC GGGCTCACCG CCGTCGACGG CGTCACCTTC
GACATCCGGC GCGGCGAGAT CCTCGGGCTC ATCGGCCCCA ACGGCGCCGG CAAGACCACG
TGCTTCAACG CCATGACCGG CGTGTACCGG CCCACCTCCG GGTCGGTCGT GTTCGACGGG
GAGCCCGTCG GGCGCAAGAA GCGGTTCCAG ATCACCCAGA TGGGCATCGC GCGCACCTTC
CAGAACATCC GGCTGTTCAA CGAGATGACG GCCCTCGAGA ACGTCGTGGT CGGCACGGAC
GCCCGGCACC GCACGTCGGT CCCGGGCGCG GTCTTCCGCA CCCCGCGGCA CCGCCGCGAG
GAGCGCGAGG GCATCGACCG CGCGATGGCG CTGCTGGAGT TCGTGGGCGT CGGGGGGCGC
GCGACCGACA AGGCCCGCAA CCTCTCGTAC GGGGACCAGC GCCGGCTCGA GATCGCCCGG
GCGCTGGCCA CCGAGCCCAA GCTGCTGTGC CTCGACGAGC CCGCAGCAGG CTTCAACCCC
GCCGAGAAGG AGGCCCTCAT GGACCTCATC CGGCAGATCC GGGACGACGG CTACACCGTC
CTGCTCATCG AGCACGACAT GAAGCTCGTG CGCGGTGTCA CGGACCGCAT CGTCGTCCTC
GAGTTCGGCA AGGTGATCGC CCAGGGCACC CCTGACGCGG TCACGAGCGA CCCGGCGGTC
ATCGCCGCCT ACCTGGGGGT TCCCGACGAT GCCACTGCTT GA
 
Protein sequence
MSTHEPGGVG AGAEHGEEFR GTEQDVAEAT PEKDLPGGGV EEPVVVDVAD VHPELADPEV 
VAEKVASDRE VHAAVGEPLL RMEDVTVQFG GLTAVDGVTF DIRRGEILGL IGPNGAGKTT
CFNAMTGVYR PTSGSVVFDG EPVGRKKRFQ ITQMGIARTF QNIRLFNEMT ALENVVVGTD
ARHRTSVPGA VFRTPRHRRE EREGIDRAMA LLEFVGVGGR ATDKARNLSY GDQRRLEIAR
ALATEPKLLC LDEPAAGFNP AEKEALMDLI RQIRDDGYTV LLIEHDMKLV RGVTDRIVVL
EFGKVIAQGT PDAVTSDPAV IAAYLGVPDD ATA