Gene Sked_20600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20600 
Symbol 
ID8633695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2296661 
End bp2297902 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID 
Productamino acid-binding protein 
Protein accessionYP_003314816 
Protein GI269795361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.739929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTC ACGCTCGACG TACACCCCAA GCACTGGCGA TCGTCCTCGC CACCACCCTC 
GTGCTGACTG CCTGCGGGCA GAAGTCCACG GACGACGAGA CGGGCTCGTC GCCCGGCGCC
AGCGCCAGTG CCACCGGCGG CCTCTCCATC GTCCCGCTCG TCCAGATCGA CCCCGAGGGC
GTCGAGGTCG AGGCGTCCAC CGGCGACACG GCGGTCGACC CGGCCGGCGA CGGTACCGCG
ACCTGCGCGG AGGGCACCAC CATCGCCATG GCCGGCGCGC TCACCGGCCC GAACGCGGCG
CTCGGCCAGA ACATCCTCAA CGGTGCACAG CTCGCGCTGG ACAAGCACAA CGAGGCCAAC
GCCGACTGCC AGGTCGCACT CAAGCAGTTC GACACCGAGG GCGACCCGCA GAAGGCCACC
CAGGTCGCAC CGCAGATCGT CGGCGACGCG AACGTCCTCG GCCTCCTCGG CCCGGCGTTC
TCGGGCGAGA CCAAGGCGAC CGGCGACATC TTCAACCAGG CCGGGCTGCT CTCGCTGTCC
GCGTCGGCCA CCAACCCCGA CCTCACCACC CTCGGGTGGA AGACCTTCTA CCGCGGCCTC
GCCAACGACG CCGTCCAGGG CCCGGCCGTC GCCAAGTACA TGGTCGACAC CCTGGGCTAC
GCCAAGGTCT GCGTGGTCGC CGACAACTCC GACTACGGCA TCGGCCTGGC CGAGCAGATC
ACCGAGGGCC TCGGCGACGC CGCAGACACC TCGTGCTCCG CCTCCGTCAA GACCGGCGAC
AAGGACTTCG CCGCCGCAGT GCAGATCATC AGCGGCGCCG AGGCCGACGC GGTCTTCTAC
GCCGGCTACT ACGCCGAGGC CGCACCGTTC GTCCAGCAGC TGCGCGACGC CGGCGTCGAG
ACCACCTTCG TCTCGGCCGA CGGCACCAAC GACCCGCAGT TCGTCGAGCA GGCCGGGTCC
TCGGCCGACG GCGCGATCCT CTCCTGCCCC TGCGGCCCCG CCCCGGACGC CTTCGCGACC
GAGTACGAGA CCGCGTTCAG CCAGGCACCC GGCGTCTACT CCGTCGAGGG CTACGACCTC
ATGACCATCA TGCTCGCCGG GATCGACTCA GGCGTGACCG ACCGTGCCGG GCTCGTCGAC
TTCGTGTCGA GCTACTCCGG CGCCGGGCTC GCCCGCAGCT ACGAGTGGAC CGACACCGGC
GAGCTCACCT CCGCACTCAT CTGGATCTAC GACGTCGAGT AA
 
Protein sequence
MRLHARRTPQ ALAIVLATTL VLTACGQKST DDETGSSPGA SASATGGLSI VPLVQIDPEG 
VEVEASTGDT AVDPAGDGTA TCAEGTTIAM AGALTGPNAA LGQNILNGAQ LALDKHNEAN
ADCQVALKQF DTEGDPQKAT QVAPQIVGDA NVLGLLGPAF SGETKATGDI FNQAGLLSLS
ASATNPDLTT LGWKTFYRGL ANDAVQGPAV AKYMVDTLGY AKVCVVADNS DYGIGLAEQI
TEGLGDAADT SCSASVKTGD KDFAAAVQII SGAEADAVFY AGYYAEAAPF VQQLRDAGVE
TTFVSADGTN DPQFVEQAGS SADGAILSCP CGPAPDAFAT EYETAFSQAP GVYSVEGYDL
MTIMLAGIDS GVTDRAGLVD FVSSYSGAGL ARSYEWTDTG ELTSALIWIY DVE