| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20520 |
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| Symbol | |
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| ID | 8633687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2285730 |
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| End bp | 2287358 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | beta-xylosidase |
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| Protein accession | YP_003314808 |
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| Protein GI | 269795353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.129044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.254652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCA CTGACCCGCA CGGACGTGCC GCCGTCGACG CACCCGAGAC CCCTCCGGCC
TCCCGTCTGC CCTGGCGGGG CGCCACGAAC CCGGTGCTGC CGGGCTTCCA CCCCGACCCG
TCGGTCTGCC GCGTCGACGA CGAGGAGGGC ACCTGGTACT ACCTCGTGAC CTCGACCTTC
GAGTACCTGC CCGGGCTGCC GGTCTACAGG TCGCGCGACC TCGTGTCCTG GGAGCTCGTG
GGGCACGCCC TGCACCGAGC CGGGCAGGTC GACCTGTCGT CGGTGCGGGA CTCGGGCGGC
ATGTTCGCCC CGACGATCCG GCACGACGGC TCGAGGTTCC TCGTCCTGTG CACCCTGGTC
GACGGACCTG CGGGGGCGTC CGGGAACTTC GTGGTGACGG CGCGGGACGC CGCCGGGCCG
TGGTCGGACC CGGTGTGGTG GCACGACGAG GGGATCGACC CGTCGCTGCT CGTCGACGAC
GACGGTCGCC TCTGGGCGCA CGGGACACGG GGTGCCCAGC CGCAGGAGTG GGACCAGCAG
ACGTCGGTGT GGGTCCGTGA GATGGACCGC GAGTCGCTGC GGCTGGTCGG CGAGGAGCGG
GTCGTGTGGA GCGGCGCCGT GCGCGGTGCG GTCTGGGCTG AGGGTCCGCA CCTGTTCCGT
CGCGACGGCC AGGTCTACCT CGTCGCGTCC GAGGGCGGGA CGGCGTTCCA CCACGCGGTG
TCGGTGGCCC GAGCAGACTC GCCGCTCGGA CCGTACGAGG GGTACGCCGG GAACCCTGTC
CTGACCCACC GGCACCTCGG TCAGGGCAGC GAGGTGGTCA ACGTGGGCCA CGCCGACCTC
GTCGACTCCC CCGACGGCTC GACCTGGGCC GTCGCCCTGG CGAGCAGGCC CGTCGGCGGC
ACCGACGTGC TGGGCCGCGA GACCTTCGTG CTGCCGGTGG AGTGGCAGGA CGGCTGGCCC
GTCTTCGCCC CCGGTGCCGG TCGCCTCGTG CCCGAGCCAT CTCACCCGGC GCCACGGGTC
GGGCCCGTCC GGGCCGGCAC GACGCACGAC GCCAGGCGCC CAGACGACCG CACGAGATCG
CTCCTCGCTG TGCGTCGGTA CCCGGACGAG GTCGCGGAGC AGGGCCCGGG AGGATCATGG
ACGATCGACG CGGGGGCTGG CCTCTCCGAG CGACGGCCGG CGTTCGTCGG GTACCGCCTG
GCAGACCTGC CGGCCCGCCT CGAGGTCGAG GTGGACGAGG TGCCCGACGG GGCGACGGCT
GCTCTGGCCC TGCGCTACAG CAGCGCGGCC TGGGTGTCGC TGGGCGTCGG TCCTCGCGGC
TCGGCGACCG AGGTGGTGGT GGTGAGCTGC GAGGGTGGGG ACGAGCACGT GCTCGCCGCG
GTGACGGTCC CAGGTCCGCC GGTCGGCCGG CTCGTCCTCG ACGTCTCCGG GCTGCGAGCG
GCCGGCACCT GGGTCCCGGC CGAGGGGGCG CCCGTCCCCG TGGGCACCGC GGGGCTCGAC
GAGCTCGGGG CGTCGGCCTC GGGCGGTTTC GTGGGCGTCG TCTACGGCGT CGTCGCCGAG
GGCACCGGGA TGGTCCGTGC GCGCGGGCTG GAGGCCGGAC CTCTGCCGGT GGCCGACGGC
ATGCCCTAG
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| Protein sequence | MPTTDPHGRA AVDAPETPPA SRLPWRGATN PVLPGFHPDP SVCRVDDEEG TWYYLVTSTF
EYLPGLPVYR SRDLVSWELV GHALHRAGQV DLSSVRDSGG MFAPTIRHDG SRFLVLCTLV
DGPAGASGNF VVTARDAAGP WSDPVWWHDE GIDPSLLVDD DGRLWAHGTR GAQPQEWDQQ
TSVWVREMDR ESLRLVGEER VVWSGAVRGA VWAEGPHLFR RDGQVYLVAS EGGTAFHHAV
SVARADSPLG PYEGYAGNPV LTHRHLGQGS EVVNVGHADL VDSPDGSTWA VALASRPVGG
TDVLGRETFV LPVEWQDGWP VFAPGAGRLV PEPSHPAPRV GPVRAGTTHD ARRPDDRTRS
LLAVRRYPDE VAEQGPGGSW TIDAGAGLSE RRPAFVGYRL ADLPARLEVE VDEVPDGATA
ALALRYSSAA WVSLGVGPRG SATEVVVVSC EGGDEHVLAA VTVPGPPVGR LVLDVSGLRA
AGTWVPAEGA PVPVGTAGLD ELGASASGGF VGVVYGVVAE GTGMVRARGL EAGPLPVADG
MP
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