| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20480 |
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| Symbol | |
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| ID | 8633683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2281333 |
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| End bp | 2283012 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_003314804 |
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| Protein GI | 269795349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.497394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.432529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCTG TCATCTCTGC ACCCCCTGGC CGACGCCCGC TCCTGGTCCG CGGCTGCGCC
GTCGCCGCCG TCTCCGCGCT CGCGCTGGCC GCCTGCTCCG ACGGCGGAGG TGGCGGCAGC
AGCGCCGCCG GCGAGCCCGT CGACCTCACC TGCGCCGTCG ACGACTACGC AGCCGACGAG
CAGTTCACCT CCCCCGAGCC GATGGAGGTG AGCATGCTCT GGACCGACTG GCCCGAAGCC
CCCGTCAAGG ACACCTGGCA GCTCTTCGAC GAGATCGAGG AGCGCACCAA CGTCCGCATC
ACCACGACGC ACATCCCGTT CAGCGACGCC CTCGAGAAGC GCAGCCTCCT CATCAGCGCG
GGCGACGCCC CCACCGTGAT CCCGCTCGTC TACACCGGTG ACGAGCGCCA GTACGCGGCC
TCGGGCGCCG TGCTGCCCAT GAGCGAGTAC GTCGACTACA TGCCGAACTT CCAGAAGTAC
TCCGAGGAGT GGGACCTCAC CGGGATGCTC GACAACCTCC GTCAGGACGA CGGGCGCTAC
TACATGGCGC CCGGCCTCCA GGAGGTGTCG GTCCCGACCT TCACCCTCAT CATCCGCAAG
GACGTCTTCG ACGAGGTCGG CGCCCCGGCC CCAGAGACCT GGGAAGACCT GCGCACCGGT
CTCGAGCTCG TCAAGGAGAA GTACCCCGAC AGCCTCCCGC TCGCCGACGG CTTCGAGGGG
GCGGCGATGC TCAACTATGC CGCGCACGCC TTCGGCACGG TCGCCGGGTG GGGCTTCGGC
AACGGCATGT TCTACGACGA GGCCTCCGGC GAGTTCGACT ACGCCGGGAC CTCGGACGGG
TACCGCGACA TGCTCGAGTA CTTCCACGGG CTCGCCGAGG ACGGCCTCCT CGACACCGAG
TCCTTCGTCG CACCGAACGA CGGCACCGGC ACCGTGATCG AGAAGGTCGC CGCCGAGCAG
GTCTTCGCGG CCTCCGGCGC CTCGGGCACG GTGCAGGAGT TCGCCACGGC GCTCGACGCC
GCAGGGGTCA CCGACTACGA GCTCCTCCAG GTCGCCCCGC CCACGGGAGA CTCCGGCGAC
ACCGTCGAGC CGAGGAACTT CTGGAACGGC TTCATGATCA CCTCGCAGGC CGCGGACGAC
CCCGACCTGT GCAGCACGGT CCAGTTCCTC GACTGGCTCT ACTACAACCC CGACGCGCGC
GAGATGCTCC AGTGGGGCGT CGAGGGCGAG ACCTACACCA AGGACGCGGA CGGCACGATC
ACGCTCGACC CGGACCACTC GTACGAGGCC TACAACCTCA ACGTGGGCTC CACCACGGAC
ATCAAGAAGG ACCTCGGCTT CGGCTCGGAC GTCCTCGCCG GGTCGTCGGA GTCGCGTGCC
CTCAAGGAGT CCTACAACCA GCCGGAGTTC GTCGAGTACG TCGACACGGT GCTCGAGACC
AGGACGCCTC GCGCCCCGTT CCCGCCCGCG CCCCTCGACG AGCTCGAGCT CGAGCAGGCC
TCGCTCCTCG GGACCCCGCT CAAGGACACC GTCGACACGG CGACCCTGCA GTTCATCCTC
GGCGACAGAG ACCTCGGCGA GTGGGACGCC TACGTGTCGC AGCTCGAGAG CCAGGGCCTG
CCGGGCTACG TGGACCTCGT CAACGGCGCC CGCGAGCGCT TCGCCGCCGA CAACGGCTGA
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| Protein sequence | MVPVISAPPG RRPLLVRGCA VAAVSALALA ACSDGGGGGS SAAGEPVDLT CAVDDYAADE
QFTSPEPMEV SMLWTDWPEA PVKDTWQLFD EIEERTNVRI TTTHIPFSDA LEKRSLLISA
GDAPTVIPLV YTGDERQYAA SGAVLPMSEY VDYMPNFQKY SEEWDLTGML DNLRQDDGRY
YMAPGLQEVS VPTFTLIIRK DVFDEVGAPA PETWEDLRTG LELVKEKYPD SLPLADGFEG
AAMLNYAAHA FGTVAGWGFG NGMFYDEASG EFDYAGTSDG YRDMLEYFHG LAEDGLLDTE
SFVAPNDGTG TVIEKVAAEQ VFAASGASGT VQEFATALDA AGVTDYELLQ VAPPTGDSGD
TVEPRNFWNG FMITSQAADD PDLCSTVQFL DWLYYNPDAR EMLQWGVEGE TYTKDADGTI
TLDPDHSYEA YNLNVGSTTD IKKDLGFGSD VLAGSSESRA LKESYNQPEF VEYVDTVLET
RTPRAPFPPA PLDELELEQA SLLGTPLKDT VDTATLQFIL GDRDLGEWDA YVSQLESQGL
PGYVDLVNGA RERFAADNG
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