| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20420 |
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| Symbol | |
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| ID | 8633677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2274267 |
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| End bp | 2275745 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003314798 |
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| Protein GI | 269795343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC TTCCCCCCAC CACCGACCAG GCCCTGCCAG GCTCCCCACC CGGCGTCCCC
TCGCCCGTCG GTGGCGCCAG CGTCTTCTCC CCCAGGCTCC GAGGCTTCAC GCTCGGCATC
CTGCTGAGCG TCGGCGCGGT CGCCTTCGAG TCCCTCGGCG TCGCGACCAT CCTCCCTGCC
GTCGCCGGCG ACCTCGGAGG GCTCGGCGGG TACGGCTGGG GGCTCTCGGC GCTCATGCTC
GCGAACATCG TCGGGACGGT CGTCGCCGGC ACCGACATCG ACCGCCGCGG CCCCGCCCGG
ACGGTGCTCG TCGGGAGCCT CGTCTTCGCG GTCGGCTGCC TCGTCGCCGG CCTGGCCGAG
AGCTGGGGTG TGTTCGTCGC CGCCCGTGCG CTCCAAGGGC TGGGGGTCGG CGCGATCATG
GCGTACGCCT ACTCCCTCGT CGGCGTCGCC TACCCGCGCC ACCTGCAGGC CGTCATGTTC
GCCTTCCTGT CCTCGGCCTG GACCATCCCC TCGCTCCTCG GCCCGGTCTT CGCCGGGGTC
GTCACCACCG CCCTCGACTG GCGCGTGGTG TTCTGGGCCA TCGCCCCGGT CACCCTGCTC
CTGCTGCCGC TCGTGCTCCC CGGCGCGCGC CGGGTCTCGC GGGAGCGCTC CGCTGAGACC
GCGAGCGCGA GGACCATGGC CACGCCGCGA CGGCCCCGCG TCTCCGCTCC CGTCTGGTTC
TCGGTCGTCC TGGCCGCAGC CACGAGCGTG CTGCTGCTCG GCCTCGAGGC CGACTCCCTG
CCGCTGCTGG TCACGACGGT CGCGGCCGGT CTGGTCGTCG CGGTCGTGGC ACTGCGCAGG
ATCGTGCCCG CGGGGACGCT GCGTCTGCGA CGCGGTGCGC CGTCGGGCGT GGTGGTCCGC
TTCCTGCTGT GCGGCGTCTA CTTCGGGTCC GAGGCGTTCC TCCCGCTGGG CCTGACGAGC
GTGCACGGCC TGGACGTCAC GACCGCCGGG CTGGGGCTCG CCGCCGGGGC CCTCGCCTGG
ACGGCCGGGT CCTTCGTGCA GGCCAGGGTC GACGCCGCCC GGCCCGGCAC GCGGGCACGG
TCGGTGCGCC TCGGGTTCTC GGCGCTGCTG GTCGGCGAGC TCGTCATGGG TGCGGGCGTC
GTCCTCCCCG ACGTGTGGGC CGGGTGGGCT GTCGTCGGGT GGACGGTCGC CGGGGTCGGG
ATGGGTGTCG CCTTCAACGC GTCGACCTCG GCGACGATGG CCGAGACCGC GAACACCTCG
GCGGGGAGCA TCAGCGCGAG CCTCCAGCTG GCCCAGACGC TCGCGACGGC GGTCGTGGCC
GGTGTCGGCG GTGCGGTGGT CGCACGGCTG GGGACGACCT CGGGGGCCTT CGGCACGGTC
TTCGCCGTCA CCGCTGCGCT GGGGCTCCTC GGGGTCCTGG TCGCCGGACG TGTGACTGCG
CAGGCCACCG GACGCAGCGA GGACACGACC ACCCGCTGA
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| Protein sequence | MPDLPPTTDQ ALPGSPPGVP SPVGGASVFS PRLRGFTLGI LLSVGAVAFE SLGVATILPA
VAGDLGGLGG YGWGLSALML ANIVGTVVAG TDIDRRGPAR TVLVGSLVFA VGCLVAGLAE
SWGVFVAARA LQGLGVGAIM AYAYSLVGVA YPRHLQAVMF AFLSSAWTIP SLLGPVFAGV
VTTALDWRVV FWAIAPVTLL LLPLVLPGAR RVSRERSAET ASARTMATPR RPRVSAPVWF
SVVLAAATSV LLLGLEADSL PLLVTTVAAG LVVAVVALRR IVPAGTLRLR RGAPSGVVVR
FLLCGVYFGS EAFLPLGLTS VHGLDVTTAG LGLAAGALAW TAGSFVQARV DAARPGTRAR
SVRLGFSALL VGELVMGAGV VLPDVWAGWA VVGWTVAGVG MGVAFNASTS ATMAETANTS
AGSISASLQL AQTLATAVVA GVGGAVVARL GTTSGAFGTV FAVTAALGLL GVLVAGRVTA
QATGRSEDTT TR
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