Gene Sked_20410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20410 
Symbol 
ID8633676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2273538 
End bp2274206 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003314797 
Protein GI269795342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.539092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.887832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CGGCTCCCGC CGCCCCGATC TCGTCGCCAC GCCAGCCGCC GCAGGGTCGA 
CCGAGAGACG CCTCGATCGA CGCCCGCGCG ACGGAGGCGG TGCTCGAGCT GCTCGGACGC
ATGCCGTACA GCGCGCTGAC CCTGGAGGCC GTCGCGTCGG CCGCAGGCAC CAGCAAGCCG
GCGCTGCGGC GCCGGTGGAA GACGCTGCCG GGGGTCGTCG TCCACACCCT CATCTCCGTG
CTGGGCACCA CTCCGACACC GGACACCGGG TGCGTGCACT GCGACCTCGT CGTCGGCATC
TCGAACCTCG CCGACACCTT CGCGGGCTCT GCCGTGACGA GCGCGCTGCC CGGGCTCGTC
TCGGACCTCG CCGGAGACCC CGAGCTCAAG GAGCGGTTCC TGCGGGACTA CTTCGAGGCC
CGTCGCCAGA CCACGCGGAC CGTCCTCGAG CACGCGGTCG CCCGCGGTGA GGTCGACGCC
GCGATCGACA TGGAGCTCAC CCTCGACCTC CTCGCCGCGC CGCTGTACTA CCGCGCCTTC
TTCACCCACC AGCCCATCGA CGCCGGCCTC GCCGAGCGCA CCGTCCTCAG CGTGCTGCAG
GGCATCGGCA CCGACACCTG GCGGCAGCAC CACGTGGCCG GAGGGCCTGC TGGTGGTACC
GAGGGGTGA
 
Protein sequence
MTQPAPAAPI SSPRQPPQGR PRDASIDARA TEAVLELLGR MPYSALTLEA VASAAGTSKP 
ALRRRWKTLP GVVVHTLISV LGTTPTPDTG CVHCDLVVGI SNLADTFAGS AVTSALPGLV
SDLAGDPELK ERFLRDYFEA RRQTTRTVLE HAVARGEVDA AIDMELTLDL LAAPLYYRAF
FTHQPIDAGL AERTVLSVLQ GIGTDTWRQH HVAGGPAGGT EG