| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20360 |
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| Symbol | |
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| ID | 8633671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2268435 |
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| End bp | 2269667 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003314792 |
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| Protein GI | 269795337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0512436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.41144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCG GACGACCATC ACAGCCCTGC CCCCTTGCCG GCTCCTCGGA GGATCCGCCG
CCCGGCGCAG AGGACCGTTG GGCTGCCGTC GGGCTCGTCG CTGTCGCGAC CTTCGTCGTC
GTGGCCGCCG AGATGATGCC CGTCGGGCTC CTCACGCCCA TGGGCTCCAC CTTGCAGGTC
AGCGAGGGCA CCGTGGGCCT CTCGCTGACC ATCACCGGAC TGGTGGCAGC AGCCACCGCC
CCGCTGGTGC CCGCGGTGGC CGGGCGGACC GACCGGAAGA AGGTGCTCGT CGCCCTCATG
GCGCTCGTGG CCCTGTCCAA CGCGGTCACC GCCCTCGCAC CGACCTTCGC GGTCCTGGCC
GGCGCCCGTG TCCTGCTGGG GGTGAGCATG GGCGGGGTCT GGGCACTCGC GGCGAGCCTG
GCGCCGGTAC TGGTGAGCCC ACTCGCGGTG GCGTCGGCGA CGACGCTCAT CTTCAGCGGG
ATCGCCGTCG CGTCGGTGCT TGGGGTACCG CTCGGGACTT TCATCGGTGG CGTAGCAGGC
TGGCGGGCGT CGTTCTGGGC CCTGGCTGCG GCGGGCGCAC TGGTCGCTGC TTCGATGGTC
GTGGCGCTCC CCTCGATACC CCCGGGAGAG CAGTCGGCGT CGGCTGGTGT CCGGGCCGTC
CTGCGCTCCC CGGGCGTCCG GACCGGGCTC ACGATCACCG CGCTGCTCGT CGCGGCCCAC
TTCTCCGCCT ACACCTATGT CCGTCCCGCG CTCGAGGTCC TCGCCGGGGT GGACACCTCG
CTCGTCGCCA CGATGCTGCT GGTCTACGGG GGGCTGGGGG TGGTGGGCAC CTTCGTCGTG
GGGCGGGCCG CGGTGAGAGC CCCCCAGACT GTGGTCTTGG TCCTCAGCTC CGGGATCGCG
ATCACGCTGC TCACCGTCGG GACGGTGGTG TCGTCACCGC TGGTCGCCGG CGCGCTCGTC
GCGGTCTGGG GGCTGCTCTA CGGCGGCGTG TCCGTGAGCA CCCAGTCCTG GGTCGCACGG
TCTGCCGCCG ACCGAGAGAG GGTCTCCGCG CTCTGGGTCG CCGTCTTCAA CGCGAGCATC
GCCGTGGGCG CTCTCGGCGG TGGCCAGGTC TATGACAGCG CCGGCCCGGC GAGGCTCTTC
TGGGTGGCGG CCGGGTTGGC TGCCGTCGCG CTCCTCGTCG CCGTCGTGGG GTCGCGGTCG
CCGAGGCATA CGAGGGCGAG ACCCGTGCGA TGA
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| Protein sequence | MQTGRPSQPC PLAGSSEDPP PGAEDRWAAV GLVAVATFVV VAAEMMPVGL LTPMGSTLQV
SEGTVGLSLT ITGLVAAATA PLVPAVAGRT DRKKVLVALM ALVALSNAVT ALAPTFAVLA
GARVLLGVSM GGVWALAASL APVLVSPLAV ASATTLIFSG IAVASVLGVP LGTFIGGVAG
WRASFWALAA AGALVAASMV VALPSIPPGE QSASAGVRAV LRSPGVRTGL TITALLVAAH
FSAYTYVRPA LEVLAGVDTS LVATMLLVYG GLGVVGTFVV GRAAVRAPQT VVLVLSSGIA
ITLLTVGTVV SSPLVAGALV AVWGLLYGGV SVSTQSWVAR SAADRERVSA LWVAVFNASI
AVGALGGGQV YDSAGPARLF WVAAGLAAVA LLVAVVGSRS PRHTRARPVR
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