Gene Sked_20200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20200 
Symbol 
ID8633655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2252375 
End bp2253400 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID 
Productpyrophosphate-dependent phosphofructokinase 
Protein accessionYP_003314778 
Protein GI269795323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.732763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.227707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG GTCTGCTCAC CGGCGGTGGC GACTGCCCAG GGCTGAACGC TGCGATCCGT 
GCGGTCGTCA AGCAAGGTCT GGGGGAGTAC GGGCACACCA TCATCGGCTT CCGCAACGGC
TGGAAGGGCG TGGTCGACGG TGACGTCCGG ACCATGTCGC GAGAGGACAT CCGCAACGTC
CTCCCGCAGG GCGGCACGCT CCTCGGCACC GCACGGTTCC ACCCGCACTC CGCCGACGGC
GGGCTCGACG GCGTCATGGC CACGCTCGAG GCCGAGCGCA TCGAGGCGCT CATCTGCATC
GGCGGCGACG GCACCCTCCA CGCCGCCAAC AAGGTCGCCG AGCAGGGCAT CAAGATCGTC
GCGATCCCCA AGACGATCGA CAACGACGTC TACGGCACGG ACCTGTCGAT CGGCTTCCAC
ACCGCGGTGA ACATCGCGAC CGAGGCGATC GACCGCATCC ACACGACCGC GGAGAGCCAC
AACCGCGTCA TGGTCGTCGA GGTCATGGGC CGGCACGCCG GCTGGATCGC CGTGAACGCC
GGCATCGCGG GCGGGGCCGA GCTCGTGCTC GCCCCCGAGG AGCCCTTCGA CATGGACCGC
ATCGTCAAGT TCCTCAAGCA CCGTCACCGC TCGCACGCGA ACTTCTCGAT CGTCGTGGTC
GCCGAGGGTG CGCTGCCCAA GGAGGGCAGC TCGATGCAGT ACGAGGCCCA GCTCGGCAAG
TTCGGCGAGA TCATTGCCGG TGCCATCGGC GAGCGGGTCG CCAACGAGAT CGCGACCCGG
ACCGGCTTCG ACACGCGCCT GACGATCCTC GGTCACGTCC AGCGCGGCGG CACGCCCACG
CCGACCGACC GCATCCTCGG CAGCCGCTTC GGCGTCGCGG CCGTCGACGC GATCAGCCGC
GGCGAGACCA ACGTCATGAC GGCCCTGCGC AACGAAGAGG TCGTCCTCGT CCCGCTCGAG
GAGATCGCCG GGAAGGTCAA GCACGTCCCC GACGACCTCC TCAGGGTCGC GCGCGTCCTC
GCCTGA
 
Protein sequence
MRIGLLTGGG DCPGLNAAIR AVVKQGLGEY GHTIIGFRNG WKGVVDGDVR TMSREDIRNV 
LPQGGTLLGT ARFHPHSADG GLDGVMATLE AERIEALICI GGDGTLHAAN KVAEQGIKIV
AIPKTIDNDV YGTDLSIGFH TAVNIATEAI DRIHTTAESH NRVMVVEVMG RHAGWIAVNA
GIAGGAELVL APEEPFDMDR IVKFLKHRHR SHANFSIVVV AEGALPKEGS SMQYEAQLGK
FGEIIAGAIG ERVANEIATR TGFDTRLTIL GHVQRGGTPT PTDRILGSRF GVAAVDAISR
GETNVMTALR NEEVVLVPLE EIAGKVKHVP DDLLRVARVL A