Gene Sked_20090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20090 
Symbol 
ID8633644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2235465 
End bp2236232 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content76% 
IMG OID 
Productglycosyl transferase 
Protein accessionYP_003314767 
Protein GI269795312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.308185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.813225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCG CGGCTGGGCG CGGTGCACGG CCCCTCGCGG CCGTGTGCGT CGTGGTGCCT 
GTCCACGACG AGCAAGAGCT CCTCGGGCGC TGCATCGCGG CGCTCCGTCA CGCCGTCGCC
CACGAGGCGC AGCGTCCCGG CGGTGTCCGG ACGGAGGTGG TCCTCGTCCT CGACGGCTGC
ACCGACGGGT CGGCCGCCAT CGCGCGGCTG TCACCGTTCC ACGTCGTCGA GGTGTCCGCC
TGCCGCGTCG GCGCTGCCCG GGCGGTGGGC GTCGACGTGG CGCTCGCCGC GGCGATGGCT
GCCGACGACG GCTCTGCTGT CGAGGCCCGC ACGCCCGGCC TCGACCAGGT GTGGGTCGCG
TCGACGGACG CCGACTCTGC GGTGCCCGTC CACTGGGTCT CCTCGCAGGT CGCGCTGGCC
GACGCCGGGG CAGACGTGGT GGTCGGCACC GTGCGCCCCG ACCCCGCCGA CCTCAGCCCG
CGCCAGCGGG CCGCCTGGGA GGCCACGCAC GTCCCGGGTC TCGCGAACGG CCACGTGCAC
GGTGCCAACC TCGGGATGCG CGCAGACGTC TACCGGGCAG CAGGCGGTTA CCCGCCCGTC
GACGAGCACG AGGACGTCGA CCTCGTGGCA CGCGCGCGGG CGACCGGCGC GCGGGTCGTG
GCTTCTGACG ACGCCTGGGT GCTCACCTCA GGACGGCAGC AGGGCAGGAC GCCCGGAGGG
TATGCCCGGT TCCTCCGCGA GGACCTCGTG GACGGCGCGC AGGTCTGA
 
Protein sequence
MSPAAGRGAR PLAAVCVVVP VHDEQELLGR CIAALRHAVA HEAQRPGGVR TEVVLVLDGC 
TDGSAAIARL SPFHVVEVSA CRVGAARAVG VDVALAAAMA ADDGSAVEAR TPGLDQVWVA
STDADSAVPV HWVSSQVALA DAGADVVVGT VRPDPADLSP RQRAAWEATH VPGLANGHVH
GANLGMRADV YRAAGGYPPV DEHEDVDLVA RARATGARVV ASDDAWVLTS GRQQGRTPGG
YARFLREDLV DGAQV