Gene Sked_20060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20060 
Symbol 
ID8633641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2231628 
End bp2232572 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content70% 
IMG OID 
Productpredicted P-loop-containing kinase 
Protein accessionYP_003314764 
Protein GI269795309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0390166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.798605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG ACGTCGCTCC GAAGACCGTC CCCTCAGGGA TCCCGCAGGT CGAAGCCGTC 
ACGCACCCTC CGGAACCGGA GACGAGCGAG GTGCTCATCA TCACGGGCAT GTCGGGTGCT
GGTCGCTCGC GTGCCGCGAT GGTCCTCGAG GACCTCGACT GGTACGTGGT CGACAACCTT
CCGCCCAAGA TGCTCGTGCC GCTCGTGGAC ATGATGACGC GCGCCGGCTC CGCGATCACC
CGCGTCGGCG CCGTCGTCGA CGTGCGCGGC CGTGAGTTCT TCAACGACCT CACCGAGGTG
CTCGCCCGGT TCCGCAAGCG CGGCATCCCG TACCGCATCC TCTTCGTCGA CTCCTCCGAC
GAGGTGCTCG TCCGCCGCTT CGAGCAGGTC CGCCGCCCGC ACCCGCTGCA GGGCGAGGGG
CGCATCCTCG ACGGGATCGG CATCGAGCGC CAGCTGCTCT CGGCGATGCG CGACCGCGCC
GACGTCCTCA TCGACACCTC CGAGCTCAAC GTCCACGACC TCGCCCGCGA GGTCCGCCGC
AGCGTCGCCG AGACCGGCCA GGCGCAGGAG ACCCTGCGCA TCAACGTCGT GTCCTTCGGC
TTCAAGTACG GGATCCCGCT CGACGCCGAC CACGTGGTCG ACATGCGCTT CCTGTCCAAC
CCGTACTGGA TCACCGAGCT GCGCCACCTC ACCGGCCGCG ACGCCCCGGT CCGCGACTTC
GTGCTGGCCC GCCCGGGCGC CCTCGAGTTC ATCGAGCGCT ACGTCGACGC GCTCGAGCCG
GTGCTCTCCG GGTACCTCAA CGAGGAGAAG CGCTACGTGA CCATCGCCAT CGGCTGCACC
GGCGGCAAGC ACCGCTCGGT CGCGACCAGC GAGGAGATCG CCCAGCGCCT GCGCGACCGC
GGCCACCGGG TGGCGGTCAC CGCGCGAGAC CTCGGCAAGG AATGA
 
Protein sequence
MTDDVAPKTV PSGIPQVEAV THPPEPETSE VLIITGMSGA GRSRAAMVLE DLDWYVVDNL 
PPKMLVPLVD MMTRAGSAIT RVGAVVDVRG REFFNDLTEV LARFRKRGIP YRILFVDSSD
EVLVRRFEQV RRPHPLQGEG RILDGIGIER QLLSAMRDRA DVLIDTSELN VHDLAREVRR
SVAETGQAQE TLRINVVSFG FKYGIPLDAD HVVDMRFLSN PYWITELRHL TGRDAPVRDF
VLARPGALEF IERYVDALEP VLSGYLNEEK RYVTIAIGCT GGKHRSVATS EEIAQRLRDR
GHRVAVTARD LGKE