Gene Sked_20040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20040 
Symbol 
ID8633639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2229567 
End bp2230547 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314762 
Protein GI269795307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.37166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCA CGGCTCAGGT CAAGGACGAA CTCGCACGGC TCAAGGTCGA CAAGACCTCC 
TGCCGCAAGG CCGAGGTCGC GGCGATGCTC CGCTTCGCCG GTGGGCTGCA CATCATCTCG
GGGCGCATCG TCATCGAGGC GGAGCTCGAC ACCGCGATCG CCGCGCGGCG CCTGCGCCAG
GCGATCTCCG AGGTGTACGG GCACACGAGC GAGATCATCG TCGTGTCGGC CGGCGGCATC
CGCCGCGGCA GCAGGTACGT CATCCGTGTG GCCAAGGACG GCGAGTCCCT GGCCCGCCAG
ACCGGCCTGC TCGACGCCCG CGGGCGCCCG GTGCGCGGCC TTCCGCCGCA GGTCGTGTCG
GCGGGCGTCG CCGAGGCCGA GGCCGCCTGG CGCGGGGCCT TCCTCGCGCA CGGCTCGCTC
ACCGAGCCCG GCCGCTCCTC GGCCCTCGAG ATCACCTGCC CCGGCCCGGA GGCCGCCCTC
GCCCTCGTGG GTTCGGCCCG CCGCCTCGGG ATCTCCGCCA AGTCGCGCGA GGTGCGCGGC
GTGGACCGCG TGGTCATCCG CGACGGCGAG GCCATCGGCG CCCTGCTGAC CCGCCTGGGG
GCCCTCGAGA CCGTCAAGGT CTGGGAGGAG CGTCGCCAGC GCCGCGAGGT CCGGGGCACC
GCCAACCGCC TCGCGAACTT CGACGACGCC AACCTGCGCC GGTCGGCACG CGCCGCCGTC
GCGGCCGGCG CCCGGGTCGA GCGGGCCTTC GACATCCTCG GCGCGGAGCT GCCCGACCAC
CTGCGCGAGG CCGGCGAGCT GCGCCTGGCG CACAAGCAGG CCTCCCTCGA GGAGCTCGGC
CAGCTGGCCG ACCCGCAGCT CACCAAGGAC GCCGTGGCAG GCCGGATCCG CCGCCTGCTC
GCGACCGCCG ACAAGCGCGC CGCAGAGCTC GGGATCCCGG ACACCGAGGC CGGCCTCAGC
CCGGACCTGC TCGACCTCTG A
 
Protein sequence
MALTAQVKDE LARLKVDKTS CRKAEVAAML RFAGGLHIIS GRIVIEAELD TAIAARRLRQ 
AISEVYGHTS EIIVVSAGGI RRGSRYVIRV AKDGESLARQ TGLLDARGRP VRGLPPQVVS
AGVAEAEAAW RGAFLAHGSL TEPGRSSALE ITCPGPEAAL ALVGSARRLG ISAKSREVRG
VDRVVIRDGE AIGALLTRLG ALETVKVWEE RRQRREVRGT ANRLANFDDA NLRRSARAAV
AAGARVERAF DILGAELPDH LREAGELRLA HKQASLEELG QLADPQLTKD AVAGRIRRLL
ATADKRAAEL GIPDTEAGLS PDLLDL