Gene Sked_20020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20020 
Symbol 
ID8633637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2226858 
End bp2228057 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
Productphosphoglycerate kinase 
Protein accessionYP_003314760 
Protein GI269795305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.659062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA TCAAGGACCT CGGCGACCTG CGCGGCAAGC GCGTTCTCGT CCGCTCCGAC 
TTCAACGTGC CGCTCGACGG CACCACGATC ACCGACGACG GCCGCATCCG CGCCGCGCTC
CCCACCCTCT CCTCGCTCGT CGAGGCCGGC GCGAAGGTCG TCGTCACGGC GCACCTCGGC
CGCCCCAAGG GTGCTCCCGA GGACAAGTAC TCGCTCGCGC CCGTCGCAGC CCGCCTCGGC
GAGCTCCTCG GCGCCCCCGT GACCCTCGCG GAGGACACCG TCGGCGAGTC CGCCAAGGCC
ACCGTCGCGG CCCTCGGCGA GGGCGAGGTC GCCCTCCTCG AGAACATCCG CTTCGACCCG
CGCGAGACCT CCAAGGACGA GTCCGAGCGC AAGAGCCTCG CGGCCGACCT CGCCGGCCTC
GCGGACTTCT ACGTCTCCGA CGGCTTCGGC GTCGTGCACC GCAAGCAGGC GTCCGTCTAC
GACGTCGCCC AGGTCCTCCC GTCCGCCGTC GGCTCGCTCG TCCTCAAGGA GGTCGAGTCG
CTGAAGAAGG CCACCGACAA CCCCGAGCGC CCGTACGTGG TCGTCCTCGG CGGCTCGAAG
GTCTCCGACA AGCTCGGCGT CATCGGCAAC CTCATCACCA AGGCAGACCG CCTCCTCATC
GGTGGCGGCA TGCTCTTCAC CTTCCTCGCC GCCAAGGGCT ACTCGGTGGG CAACTCGCTC
CTCGAGGAAG ACCAGGTCGA GACCGTCAAG GGCTACCTCG CCGACGCCGA GAAGGCCGGC
GTGGAGATCG TCCTGCCCGT CGACATCCTC GTCGCCGACG AGTTCAAGGC AGACTCGCCC
GCGACCGTCG TCGCCGCCGA CGCCATCCCC GACGGCAAGA TCGGGCTCGA CATCGGCCCC
GAGTCGCAGA AGCTCTTCGC GTCGAAGATC GTCGACGCCA AGACGGCCGT CTGGAACGGA
CCGGCCGGCG TGTTCGAGTT CGAGGCGTTC TCCGGTGGAA CCCGTGCCGT CGCCCAGGCG
CTCGTCGACG CGACCAGCAA CGGCGCCTTC ACGATCGTCG GCGGTGGCGA CTCCGCCGCG
GCTGTGCGCA TCCTCGGCTT CGACGAGGCC GGCTTCAGCC ACATCTCGAC CGGTGGCGGC
GCGAGCCTCG AGTTCCTCGA GGGCAAGTCC CTCCCGGGGA TCGCCGTCCT CGACTCCTGA
 
Protein sequence
MKTIKDLGDL RGKRVLVRSD FNVPLDGTTI TDDGRIRAAL PTLSSLVEAG AKVVVTAHLG 
RPKGAPEDKY SLAPVAARLG ELLGAPVTLA EDTVGESAKA TVAALGEGEV ALLENIRFDP
RETSKDESER KSLAADLAGL ADFYVSDGFG VVHRKQASVY DVAQVLPSAV GSLVLKEVES
LKKATDNPER PYVVVLGGSK VSDKLGVIGN LITKADRLLI GGGMLFTFLA AKGYSVGNSL
LEEDQVETVK GYLADAEKAG VEIVLPVDIL VADEFKADSP ATVVAADAIP DGKIGLDIGP
ESQKLFASKI VDAKTAVWNG PAGVFEFEAF SGGTRAVAQA LVDATSNGAF TIVGGGDSAA
AVRILGFDEA GFSHISTGGG ASLEFLEGKS LPGIAVLDS