Gene Sked_19950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19950 
Symbol 
ID8633630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2220273 
End bp2221409 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content70% 
IMG OID 
Producttransaldolase 
Protein accessionYP_003314753 
Protein GI269795298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.55857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAGA ACGGCAGCAC CCCCACCCAG TCCGAGGCGA CGTCCCGACT CAGCAGCGAG 
GGGGTCGCCA TCTGGCTCGA CGACCTCTCG CGCGAGCGCA TCACCACCGG CAACCTCGCC
GACCTCGTCG CCACCCGCGA CGTCGTGGGC GTCACCACCA ACCCGACCAT CTTCGCGAGC
GCGCTCTCGA AGGGCGAGAG CTACGACGAG CAGCTCACCG AGATCGCCGC GCAGGGCACC
GACGTCGACG ACGCCGTCTG GGAGATCACC ACCCGCGACG TCCGCGACGC CTGCGACGTG
CTCCGCCCCG TCTACGACCG CACCGACGGT GTCGACGGCC GCGTGTCCAT CGAGGTCGAC
CCCCGCATGG CGCAGGACCC CGACGCCACC GGCAAGCTCG CCGAGCGCCT GTGGTCGACG
GTGGACCGGC CGAACCTGTT CATCAAGATC CCGGCCACCG AGAAGGGCCT CTCCGCCATC
ACCGCGGCGA TCGCCCAGGG CATCAGCGTC AACGTCACGC TGATCTTCTC GCTCGAGCGC
TACTCCGCCG TGATCGACGC GTACCTCACC GGGCTCGAGC AGGCGCTCGA GGCCGGCCGC
GACGTCTCCG ACCTCGCGTC CGTCGCGTCG TTCTTCGTGT CCCGCGTCGA CGGCGCGATC
GACAAGGAGC TCGAGGAGAT CGGCTCCGAC GAGGCGAAGG CCCTCCTCGG GAAGGTCGCG
GTGGCCAACG CGCGCCTCGC CTACGAGATC CACTGCGAGA CGCTCGCCTC CGACCGCTGG
AAGGCCCTCG AGGCCCGCGG TGCCCGTCCG CAGCGCCCGC TCTGGGCGTC CACGGGGGTC
AAGAACCCTG ACTACCCCGA CACGCTCTAC GTGACGGAGC TCGTGGCCCC GGGCGTCGTC
AACACGATGC CCGAGAAGAC CCTCCAGGCC GTCGCCGACC ACGGCGACAT CACCGGCGAC
ACCATCACCG GCACCTACGA CGACGCCCGT GCGACGCTCG ACACGTACGC GCGTCTCGGC
GGCGACCTCG CCGAGGTCAC CCGTAGTCTC GAGGAGGACG GCCTCCAGAA GTTCGAGGCC
AGCTGGGACG AGCTCCTGCA GACCGTCCGC GACGGACTCT CCGGAGCCTC GTCCTGA
 
Protein sequence
MSENGSTPTQ SEATSRLSSE GVAIWLDDLS RERITTGNLA DLVATRDVVG VTTNPTIFAS 
ALSKGESYDE QLTEIAAQGT DVDDAVWEIT TRDVRDACDV LRPVYDRTDG VDGRVSIEVD
PRMAQDPDAT GKLAERLWST VDRPNLFIKI PATEKGLSAI TAAIAQGISV NVTLIFSLER
YSAVIDAYLT GLEQALEAGR DVSDLASVAS FFVSRVDGAI DKELEEIGSD EAKALLGKVA
VANARLAYEI HCETLASDRW KALEARGARP QRPLWASTGV KNPDYPDTLY VTELVAPGVV
NTMPEKTLQA VADHGDITGD TITGTYDDAR ATLDTYARLG GDLAEVTRSL EEDGLQKFEA
SWDELLQTVR DGLSGASS