Gene Sked_19680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19680 
Symbol 
ID8633603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2191717 
End bp2192289 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID 
ProductClp amino terminal domain-containing protein 
Protein accessionYP_003314727 
Protein GI269795272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00680151 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TGCAGCACGA GGCCACGGCG CTCGGAGCGC ACGTCTACGG CTCCGAGCAC 
GTCCTGCTCG GCCTGCTCGC GACAGGAGGT CTTCTCGCTG ACGCGGTCAC CGCCGTCACC
CCCTCGTTGA CCTACGCCGC AGTCCACGAC GCCGTAGAGC GCTCGGCTGA CGACGCGCCT
CTCATCGGGA GCCTCGGCCT CTCGACGGTC GCAGCGCAGG TGGCCGAGGC GCCACGCCCG
ATCCGGACCC CTCGTAACCG ACACACGCCA GAGCTGCAGT CAGCGCTGAA CACCGCATCA
GCCGGGTGGG GCCAGCTCCG CAAGAACGGC TCCCTTCCCA AGGAGAGCAA GCTGACCAGC
ACGGTCCTCT GGCTCGCAGC CCTGGAACCC ACCGCCCGCG CGTCACGACT CCTGCAGGCA
CTCGACGTCG ACGTCGACCA GGTCCGTGCG GAGGTGCTCG CCGCCGCAGC CACCCCTGGC
GCACCGGCGC CGACCTGGCC GACCGAGGTG CGGACCGGGC CGGTCACCCG GCTGGTGCAG
CGGATCTTCA GCCGCGCGAG CACGGCAGGC TGA
 
Protein sequence
MTAMQHEATA LGAHVYGSEH VLLGLLATGG LLADAVTAVT PSLTYAAVHD AVERSADDAP 
LIGSLGLSTV AAQVAEAPRP IRTPRNRHTP ELQSALNTAS AGWGQLRKNG SLPKESKLTS
TVLWLAALEP TARASRLLQA LDVDVDQVRA EVLAAAATPG APAPTWPTEV RTGPVTRLVQ
RIFSRASTAG