Gene Sked_19520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19520 
Symbol 
ID8633587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2174302 
End bp2175345 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003314711 
Protein GI269795256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.133929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC TCCCGCGCGC CCGCAGCGCG TCTCTCGACC CTCGTGGCCA CCGCCGTCAA 
CAGCGCCGTG CCCTCGCAGC CGTGGCCCTC GTGTCGACGC TGTTCCTCAG CGCCTGCTCG
TCCGATGCGG CGCCCTCCGA CGAGCCCGAC GGCACCTGGA CCTACCAGAG CGACTTCGGT
CCGGTCGAGA TCCCGGAGAA CCTCGAGCGG ATCGTGTCCG TCGACTTCTA CACCCCCGCC
GCCCTGATGG ACCTCGGTGT CACGCCGGTG GGCGTCGTCA ACACCTACCT CACCGACACC
GAGGGAGCCG CCATCCCCGG CCAGTACACC GAGGCGGTCG CGGAGCAGGG CATCGGGTCG
ATCGGGGAGT ACTACGAGCT GAACCTCGAG GCGATCGTCG CGGCAGACCC GGACCTGATC
ATCGCGACCG ACGACTTCCT GCCCATCGAG GACCCGATGC GCGAGAAGCT CGAGCAGGTC
GCCCCGATCC TCACCTTCAC CGCCCGCGAC GGAGACAGCT GGCGGACGCG TGCGACCGAG
CTCGCCGTGA TCCTCGACAA GGAGGACGAG CTGCAGCCGC TCGTCGAGGA GTACGAGGCT
CGCCGTGACG CGATCAAGGA CGAGTACGCC GACATCCTCG ACAGCTACGC CGTCACCGTG
CTGGCCCCCG AGCCCGACGA GTGGGGGACG TACGCCGACA CACACTTCTC CACCCCGATC
CTCCGCGACC TCGGCGCGAC CTTCCGCGAG CAGGAGGACG ACGAGGTCAA CGAGAACGGC
TTCCCCAGCT GGTTCTCCTA CGAGAGGCTC GACCGGCTCT CGAACGCCGA CGTCGTCTTC
GTGCTGCCGA AGGTCGACAC CGACGTGATG GCCCGCCTCG AGTCCAACGG GATATGGACC
AGCCTGCCCG CGGTCCAGGA CGGTCTGGTC TTCGAGTACA TCCCGCTGTC GCCGACCGGC
TCCTACGGTT GGGCGACGGA GAACCTCGAC GACCTCGAAG CGCTGCTCGG CGAGGTCCAG
GCCGCCATCG ACGCGAACGC CTGA
 
Protein sequence
MSSLPRARSA SLDPRGHRRQ QRRALAAVAL VSTLFLSACS SDAAPSDEPD GTWTYQSDFG 
PVEIPENLER IVSVDFYTPA ALMDLGVTPV GVVNTYLTDT EGAAIPGQYT EAVAEQGIGS
IGEYYELNLE AIVAADPDLI IATDDFLPIE DPMREKLEQV APILTFTARD GDSWRTRATE
LAVILDKEDE LQPLVEEYEA RRDAIKDEYA DILDSYAVTV LAPEPDEWGT YADTHFSTPI
LRDLGATFRE QEDDEVNENG FPSWFSYERL DRLSNADVVF VLPKVDTDVM ARLESNGIWT
SLPAVQDGLV FEYIPLSPTG SYGWATENLD DLEALLGEVQ AAIDANA