| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19500 |
|---|
| Symbol | |
|---|
| ID | 8633585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2172966 |
|---|
| End bp | 2173511 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, tetR family |
|---|
| Protein accession | YP_003314709 |
|---|
| Protein GI | 269795254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.64021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGCA CGAAGGTCGA GCAGAAGATC TTCGTCGCCG CGCTCGAGAT CCTCCGCAGC
CGCGGTCCGC TCGCCGTGAG CGTCGAGTCG GTGGCCGCCG CCTCCGGCGT CGCGAAGACG
ACCATCTACC GTCGGTACGC CAACCGCGAC GAGATGCTCA CCGCCGCTGT CGCCTCCATC
GCGGCCGAGA CCGAGATCCC CGAGAGCCTC TCCGCGCACG ACGCGATCCG GTGGGTGCTG
CGGCACGCCA CGGACACCAT CGAGAACGTC GTGGGGCGCG GCACCGTCGC CGCGGTCCTC
GTCGACGCCG ACCCTGCCTT CACGACGCTG CTCCGCGGCC TCATCCGCAC GTCGGCCAGC
CCGTTCCGCG ACGACCTGCG GGCACGCTCC GAGCGCGGCG AGATCAAGCG CGACCTCGAC
ATCGAGCTGG TCATCAGCAT GCTGCTCGGC GCCGTGGTCG CCGAGCTGGT CCGCGGCCGC
CCCACGGACG CCGCCTGGGT CGAGACGGTC CTCGCCCTCG TCTGGCCGGC GCTCGAGCCT
GTCTGA
|
|---|
| Protein sequence | MVRTKVEQKI FVAALEILRS RGPLAVSVES VAAASGVAKT TIYRRYANRD EMLTAAVASI
AAETEIPESL SAHDAIRWVL RHATDTIENV VGRGTVAAVL VDADPAFTTL LRGLIRTSAS
PFRDDLRARS ERGEIKRDLD IELVISMLLG AVVAELVRGR PTDAAWVETV LALVWPALEP
V
|
|---|
| |