Gene Sked_19490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19490 
Symbol 
ID8633584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2171193 
End bp2172866 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content70% 
IMG OID 
ProductFAD/FMN-dependent dehydrogenase 
Protein accessionYP_003314708 
Protein GI269795253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGTCAAGCA CATGAAGTGG TGGGGCTGGG GCAACGAGGG CGTGGGGTTC 
CACCACGAGG ACAAGCCCGG CTTCGCCCCC TTCGTGGAGA AGGCTGTCGG GCTCGACCTC
GGCTCCGCGA CGCGCGCGAG CGAGCCGTCC TTCGAGGACG TCGACGTCCC GGCCAGCCGC
GCGTCCGAGG GCTTCGTCCG TGAGCTCACG GCCATCGTCG GCGGCGAGCA CGTGACGACC
GACGACATGG TCCGCGTCAT CCATACCTAC GGCAAGGGCC TGCGCGACCT CGTGCGCATC
CGCGGGAACC AGATCCTGCG CTCCCCCGAC GTCGTCGTGT ACCCGGCCGA CGAGGCGCAG
GTGCAGCGCG TGGTCGACGC GGCCGTCGCC GTCGACGCCG TGATCATCCC CTTCGGCGGG
GGCAGCAACA TCGCCGGCAG CCTCGAGCCG CTCCCCGCCG AGACCCGCAC CGTGGTGTCC
CTCGACCTCG GTCGGCTCCG CGAGGTCGTC GACATCGACG CCGACTCCGG CCTCGCCCGC
GTGCAGGCCG GCGCCCAGGG CCCCGACCTC GAGGCGCAGC TCAACGCGAA GGGCTGGACC
ATCGGGCACT TCCCCGACAG CTTCACGCAC TCGACCGTCG GCGGCTGGGT CGCGACCCGC
TCGACCGGCA TGCAGTCCGA CAAGTACGGC GACATCGCCG ACATCGCCCG CGGCCTGCGC
GTCGTGCGCC CCGGCGACGT CCTCGTGCTG CGCCCGCTGC CCAGCACGTC GAGCGGGCCG
AGCGTCCGCG AGATGATCCT CGGCAGCGAG GGCCGCCTCG GCGTCATCAC GGAGGTCACC
GTCCAGGTGC ACCGCATCCC CGAGAAGCGG AACATCTACG CGTACTTCTT CCCCACCTGG
GAGGCGGGCG TCGCCGCGAT GCAGGCGATC TCCGAGTCCG ACGCGTCGCC GTCGATCACC
CGCATCTCCG ACGCGCGCGA GACCGCCTTC ACGCTCGCGA CGAGCAAGAA GCGCAGCGGG
TTCTCCAAGT TCACCGCCGA GACCGCCCTG CCCAAGATCA TGTCCTCCAA GGGCTGGGAC
CTCGACACGA TCTGCCTGTC GTTCATCGGC TACGAGGGCG GCGTCGCGCA CGCCAAGCAC
CAGAAGAAGC TCGTCGACGC GATCGTCAAG AAGCACGGCG GCATGGGCGT CGGCGAGGGC
CCTGGCCTGC TGTACGACCA GAAGAAGTTC GACACCCCGT ACCTGCGCGA CTTCTTGCTC
GACATGGGCG CCGCCGGCGA CGTGTCGGAG ACCGCGGCGC CGTGGTCGAG GCTCAACCAG
GTGCACGACG CCGTCTACGA GGCCGCGCAC AAGGCCTACG CCGAGATCGG CGTGACCGGC
TGGATCATGT CGCACCTCTC GCACTCGTAC CACTCCGGCG CGTGCCTGTA CTTCACCTTC
GCCTTCGTGT TCCAGGACGA CCCGCTCACC GAGTACGACA CGGTCAAGAG CGCCATCCAG
CAGGCCTTCG TCGACAACCA CGCGACCATC TCGCACCACC ACGGCGTGGG ACGCGAGCAC
TCCGCGTGGC TGGAGCAGGA CATCTCCCCC GAGGGCGTCA AGGTGATGAC GGCGCTGTTC
GAGGGCGCGG ACCCCGGGGC GCACTTCAAC CCGAACAAGG TGGTCGCGGA CTAG
 
Protein sequence
MTDTVKHMKW WGWGNEGVGF HHEDKPGFAP FVEKAVGLDL GSATRASEPS FEDVDVPASR 
ASEGFVRELT AIVGGEHVTT DDMVRVIHTY GKGLRDLVRI RGNQILRSPD VVVYPADEAQ
VQRVVDAAVA VDAVIIPFGG GSNIAGSLEP LPAETRTVVS LDLGRLREVV DIDADSGLAR
VQAGAQGPDL EAQLNAKGWT IGHFPDSFTH STVGGWVATR STGMQSDKYG DIADIARGLR
VVRPGDVLVL RPLPSTSSGP SVREMILGSE GRLGVITEVT VQVHRIPEKR NIYAYFFPTW
EAGVAAMQAI SESDASPSIT RISDARETAF TLATSKKRSG FSKFTAETAL PKIMSSKGWD
LDTICLSFIG YEGGVAHAKH QKKLVDAIVK KHGGMGVGEG PGLLYDQKKF DTPYLRDFLL
DMGAAGDVSE TAAPWSRLNQ VHDAVYEAAH KAYAEIGVTG WIMSHLSHSY HSGACLYFTF
AFVFQDDPLT EYDTVKSAIQ QAFVDNHATI SHHHGVGREH SAWLEQDISP EGVKVMTALF
EGADPGAHFN PNKVVAD