Gene Sked_19400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19400 
Symbol 
ID8633575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2160431 
End bp2161609 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314699 
Protein GI269795244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA CCCCACTCAC CTCCGTCCCG GTCACCGACG CCCTCGTGCG CGGCGCAGCC 
GAGCTCGAGA CGACCGACCA CGGCGTCCGG GTACACCGGC TGCCCGCGTG GGCGCGCGCA
CAGTGCGCCG ACCCGCAGCT CGCCATGGTC GAGGCGCAGC CCTCGGGCGT GCGGGTCGCG
TTCCGCACGC GAGCCACCAC GGTCGAGATC GACCTGCTGC GGTCCCGCAC CACCTACTCC
GGGGTGCCGC CACGCCCCGA GGGGATCGTC GAGCTGAGCG TCGACGGACA GGTCGTGGGG
CAGTCCATGA CCTCCGGGGG GACCACGGTG ACCATCGACA TGGCGACCGG CACACCGTCC
GTGGACGTCG GTCCCTCGCA CACGGCACGC TTCGACGGGC TGCCGGACGA GGACAAGACC
GTCGAGATCT GGCTGCCGCA CAACGAGCAG GTCGAGATCG TCGACCTCCG CGCGGACGCC
CCCGTCTCCC CCGCTCCGCA GGACCGACCC GTGTGGGTGC ACCACGGCAG CTCCATCAGC
CACGGCTCGA ACGCCACCCA CCCCACGGCC ACCTGGCCCG CCGTCGCGGC ACGCCTGACC
GGCGTCGAGC TGGTGAACCT CGGGTTCGGC GGCAGCTCGC TGCTCGACCC CTTCATGGCC
CGGACCATCC GCGACACCCC CGCCGACCTG ATCTCGGTCA AGCTCGGCAT CAACGTCGTC
AACGCCGACC TCATGCGCCT GCGCGCCTTC GGGCCCGCCG TCCACGGGTT CCTCGACACC
ATCCGCGAGG GCCACCCGAC CACACCGCTG CTGGTCGTCT CGCCCGTCTG GTGCGAGATC
CACGAGGAGA CACCCGGGCC CGGGGCCTTC GACCTCGAGG CGCTGGCCAG CGGGAGGCTC
GCCTTCCGCG CCACCGGCGA CCCCACCGAG GTCGCCGCCG GGAAGCTCAC GCTCACGGTG
ATCCGTGCCG AGCTGGAGCG CATCGTCCAG GAGCGCCAGG CCACCGACCC GCACCTCACC
TACCTCGACG GCCGCGAGCT CTACTCCGCG GACGACGCCG TCGAGCACCC GATGCTCGAC
AACCTCCACC CGGACGCCGC CACCCACCAG ACGATGGGCG AGCGGTTCGC CGAGACGGGG
TTCGGGAAGC TCGGTCAGAC TGGTCGTCGA GCCCTATGA
 
Protein sequence
MTSTPLTSVP VTDALVRGAA ELETTDHGVR VHRLPAWARA QCADPQLAMV EAQPSGVRVA 
FRTRATTVEI DLLRSRTTYS GVPPRPEGIV ELSVDGQVVG QSMTSGGTTV TIDMATGTPS
VDVGPSHTAR FDGLPDEDKT VEIWLPHNEQ VEIVDLRADA PVSPAPQDRP VWVHHGSSIS
HGSNATHPTA TWPAVAARLT GVELVNLGFG GSSLLDPFMA RTIRDTPADL ISVKLGINVV
NADLMRLRAF GPAVHGFLDT IREGHPTTPL LVVSPVWCEI HEETPGPGAF DLEALASGRL
AFRATGDPTE VAAGKLTLTV IRAELERIVQ ERQATDPHLT YLDGRELYSA DDAVEHPMLD
NLHPDAATHQ TMGERFAETG FGKLGQTGRR AL