Gene Sked_19390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19390 
Symbol 
ID8633574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2159773 
End bp2160342 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003314698 
Protein GI269795243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CAGGCATCAC ACCGGCCCGG CTCGCCGAGG CCGCAGCCGA CCTCGCCGAC 
GAGTCTGGTC TCGAGCAGGT GACCGCCGCC GCGGTCGCCC GACGGTTCGG CGTCCAGACC
GCGAGCCTGT ACTCGCACGT CTCCGGGACC CCCGCACTGC GCGAGAGCGT GTCGCTGCTC
GCCCTCGCCG AGCTCGCCGA CCGCGCCGAG GCAGCCGTCC TCGGCCGGTC CCGACGAGAC
GCGCTCGCCG GGCTCGCCAA CGCGTTCCGC GACTACGCCC GCGAGCACCC CGGACGGTTC
GCCGCGACCG TCGTCCCGCT GTCCGCCGAG ACCGCGCGTG CGAGCGCCGG GCCACGGCAC
GCCCGCCTCA TCGCCGCGGT CCTCCTCGGC TATGGGCTCG ACGGGGCGGT CCACGTCCAC
GCCACCCGGC TGCTCGGCAG CACGATCCGC GGGTTCATCA CCATCGAGGC AGGTGGCGGC
TTCGACCACA GCACCCCGCC ACCGGGCGAG AGCTGGGACG AGATCATCGA CGCCCTCGAC
GCGATCCTGT CCGACTGGCC CACGCGCTGA
 
Protein sequence
MARAGITPAR LAEAAADLAD ESGLEQVTAA AVARRFGVQT ASLYSHVSGT PALRESVSLL 
ALAELADRAE AAVLGRSRRD ALAGLANAFR DYAREHPGRF AATVVPLSAE TARASAGPRH
ARLIAAVLLG YGLDGAVHVH ATRLLGSTIR GFITIEAGGG FDHSTPPPGE SWDEIIDALD
AILSDWPTR