Gene Sked_19350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19350 
Symbol 
ID8633570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2155462 
End bp2156343 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003314694 
Protein GI269795239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.449157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.837307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCAGGACAGG TGCGACCCCC GAGGTGAAGG GCGCGCCGGA CAGCAGGGTC 
GAGACGGGCG CCACCGCTCC CGGCACTAAC CCCGCCCCAC GGGGCTCGGC CCGACGCCCT
GCCACCGGCC CGGGCCGCTG GCGTCGTGTC GCCGTCGGCG CGATCCTCCC GCTCCTGGTG
CTCGCCGCCT GGACCTGGGT GACCGAGACC GGCCGTGTCC CGGCGTACCG GCTGCCGTCG
CCGGAGTCGG TGTGGTCCGC GGCCGTGGAC CTGGCTCAGC GCGGCCTGCT GGGCCAGTAC
GTGGCGATCT CGACGCAGCG CGTCCTCATC GGCTTCGCCA TCGGGGCGGT GATCGGCCTG
CTGCTCGGTG CGGTCGTGGG GCTCTCGCAC TGGGCGCGCG GCCTGCTCGC ACCGTCCTTC
GACGGCCTGC GTGCCGTGCC GTCGCTCGCC TGGGTGCCGC TGCTGGTGCT CTGGGTGGGC
ATCAACGAGG ACTCCAAGAT CATCCTCATC GCGATCGGGG CGTTCTTCCC CGTCTACACG
ACGGTCGCCG GGGCGCTCCG GCACGTCGAC CCGCACCTCG TCGAGGCAGG GCGCGCCTAC
GGCCTCAGCG GGCCGCGGCT GCTCGCCCAG GTGCAGCTGC CGGCCGTCGT CCCGTCGGTC
CTCGCGGGCC TGCGCCTGGC GCTCGCGCAG TCGTGGCTGT TCCTCGTGGC GGCCGAGCTG
CTCAACTCGT CGATGGGCCT GGGGTTCCTG CTCGTCGACT CGGGCCAGAA CGGCCGGGTG
GATCGCATGA TCCTCTCGAT CGTCCTGCTC GCCCTGCTAG GAGGCCTGAC GAACGCCCTC
GTCGGCCTCG CCGAGAAGTA CCTGCTGAGG ACGTGGTCAT GA
 
Protein sequence
MTATRTGATP EVKGAPDSRV ETGATAPGTN PAPRGSARRP ATGPGRWRRV AVGAILPLLV 
LAAWTWVTET GRVPAYRLPS PESVWSAAVD LAQRGLLGQY VAISTQRVLI GFAIGAVIGL
LLGAVVGLSH WARGLLAPSF DGLRAVPSLA WVPLLVLWVG INEDSKIILI AIGAFFPVYT
TVAGALRHVD PHLVEAGRAY GLSGPRLLAQ VQLPAVVPSV LAGLRLALAQ SWLFLVAAEL
LNSSMGLGFL LVDSGQNGRV DRMILSIVLL ALLGGLTNAL VGLAEKYLLR TWS