| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19300 |
|---|
| Symbol | |
|---|
| ID | 8633565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2149915 |
|---|
| End bp | 2150823 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix protein |
|---|
| Protein accession | YP_003314689 |
|---|
| Protein GI | 269795234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.109616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC CGGAGGAGCT GCGTGACTTC CTCATGACTC GTCGCGCCCG GATCACCCCA
GAGCAGGTCG GCCTGGTGTC TCACGGCACC CGCCGGGTCC CGGGGCTGCG CCGGGAGGAG
GTGGCCATGG CTGCGGGGGT CTCGACGGAC TACTACGTGC GCCTCGAGAA GGGCAAGGTC
GTCAACCCGT CGGACTCGGT GCTCGACGCG GTGTCCCGCG TGCTCGAGCT CGACGAGGCC
GAGCACGTCC ACCTCTACGA CCTGGTCCGC GCCACGTGCC GACGCACCGG CGCCACCGCT
CGCACCCGGC CTGGTGGGCC GGTGCCGCGG CCCAGCCTGC AGTGGATGGT CGACTCGATG
ACCGACGCGG TCGCCGTCGT CGGCAACCCC TACCTGGGCA TCACCGCGAT GAACCACCTG
GCCCGGGCGA TGTTCTCCCC CATGCTCGAC ACGGTCACCG ACGGTCGAGC GAACTTCTCG
CGCTTCGCGT TCCTCGAGCC CACCGCACAC GACTTCTACG CCGACTGGGA GAGCGCAGCC
CGAACCTGCG TCGCGCTGCT GCGCATGGCC CTCGGTCGCC AGCCCCACCA GCGCGAGCTG
CAGGCCCTCG TCGGCGAGCT CTCGACGCAC AGCGCCGAGT TCCGCACCAT GTGGGCCGCG
CACGAGGTCC GTCTGCACCA CTCGGGCACC AAGGCCTTCA ACCACCCCGA GGTCGGCGTC
GTCGAGCTGA TGTACCACTC GATCGAGCTG CCCAGCGACC CTGGGCACAC GCTGACCATC
TACAACGCCG TCCCCGGCAC CCCGTCGGCC GACGCGCTCA AGCTGCTGTC GAGCTGGGCG
GCGAGCCAGG GTCGAGTCGA GGGGGCAGGC GGGGTCGCGG GCGGTGCGGC GGTCACCCCG
AGCGCCTGA
|
|---|
| Protein sequence | MKNPEELRDF LMTRRARITP EQVGLVSHGT RRVPGLRREE VAMAAGVSTD YYVRLEKGKV
VNPSDSVLDA VSRVLELDEA EHVHLYDLVR ATCRRTGATA RTRPGGPVPR PSLQWMVDSM
TDAVAVVGNP YLGITAMNHL ARAMFSPMLD TVTDGRANFS RFAFLEPTAH DFYADWESAA
RTCVALLRMA LGRQPHQREL QALVGELSTH SAEFRTMWAA HEVRLHHSGT KAFNHPEVGV
VELMYHSIEL PSDPGHTLTI YNAVPGTPSA DALKLLSSWA ASQGRVEGAG GVAGGAAVTP
SA
|
|---|
| |