Gene Sked_19160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19160 
Symbol 
ID8633551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2128377 
End bp2129336 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC-type polysaccharide/polyol phosphate export systems, permease component 
Protein accessionYP_003314675 
Protein GI269795220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.338631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TCCAGAGCGA CGAGACGAGC GCGAGCGCGA CCGGGACGAG CGCGACCGCG 
ACGAGCTCCT CCGGTGGTGG TGCGCCTTCC CAGGGCACCG GTCTGCAGAC CGCCGTCCCG
ACCTCGGTGA TCGAGATCCC CGAGGTGCGC GGGGGCGTCC TCGCCCCGCT CGTGTCCGCG
GTCCGTGACG GCTGGGTCGT CGCGCGACGC AACGTCGTGA ACGTGCGGCG GACGCCTGGC
GCGCTCGTGA CGGGGGTGGC GCAGCCGATC ATCTTCGTGC TGATCCTGGC GTTCGTGTTC
GGCGGCGCGC TGGGGGGCGA CGCGTACCGT GAGTTCCTCA TCGGCGGCAT CCTGGCGCAG
ACGCTGACGT TCAACTCGTC CTTCACCGCG GTCTACCTCG CGAAGGACCT GCAGTCCGGG
CTGATCGACC GCTTCCGTGC GCTGCCCATG TCCCGGGTCG GCGTGATCCT CGGGAGGACG
ACGTCTGACC TGGTGACGAG CGGCATCTCG ATCGTCGTGA TCGTGCTGTG CGGGCTCGCC
ATCGGGTGGC GCGTCGACAA CGGTGTCGGG CAGGTGCTCC TCACCTTCGG GCTGCTGGTG
CTGTTCGCCT TCGCGACGTC GTGGATCGGT GCGGCCATCG CGCTCACCGC GCGCAGCGTC
GAGGTCGCGC AGAGCCTCGG TCTGCTGTGG CTGTTCCCGG TGTGCTTCAT CTCCGGTGCT
TTTGTGTCCG CCGACATGCT CCCGGGCGTG CTGCGGACGA TCGCCGAGTG GAACCCCGTG
ACTGCTGTCG CGACTGCGGT CCGTCAGGGC TTCGGCAACG AGCCTCCCGC CGGCTTCGAG
GTCGCTGATG GCTGGGCCGC GCAGAACGCG ATGCTCTACG CCTTCGTGTG CTGCATCGCG
ATCATCGCGG TCTTCGCCCC GATCGCTGTC GGCCAGTACC GGCGCATCAG CAAGCGATGA
 
Protein sequence
MSTLQSDETS ASATGTSATA TSSSGGGAPS QGTGLQTAVP TSVIEIPEVR GGVLAPLVSA 
VRDGWVVARR NVVNVRRTPG ALVTGVAQPI IFVLILAFVF GGALGGDAYR EFLIGGILAQ
TLTFNSSFTA VYLAKDLQSG LIDRFRALPM SRVGVILGRT TSDLVTSGIS IVVIVLCGLA
IGWRVDNGVG QVLLTFGLLV LFAFATSWIG AAIALTARSV EVAQSLGLLW LFPVCFISGA
FVSADMLPGV LRTIAEWNPV TAVATAVRQG FGNEPPAGFE VADGWAAQNA MLYAFVCCIA
IIAVFAPIAV GQYRRISKR