Gene Sked_19150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19150 
Symbol 
ID8633550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2127241 
End bp2128380 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content71% 
IMG OID 
Productphosphopantetheinyl transferase 
Protein accessionYP_003314674 
Protein GI269795219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.348179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TGCTCGACGC GTCCGTCGAC GACGTCCTGG CCGCGTGCGG CAGGCTGTCG 
GCGGCGGGCG CGCTCGTGGG TGGTGCGGTG CCATCTGTGC AGCGAGCGTC GTCTGTCGAC
CGGGCTTCGT CTGTCGACCT AGCGTCGTCT GTCGACCGGG CTTCGTCTGG CGACCAGGCG
TCGTCTATTC ACCGGGCTTC GTCTGTCGAA CGGGCGTTGC CTGGCCACCC CGCGTTGACT
GTCGACTCGG CGTTGCTGGG CGACCAGGCG TTTCCTGACC AGCAGGCGTC GACTGACCAG
ACGGCAGCAG CTGTCTGTCC GACATCGGGC GGCGTCGCTG CGCTCGGGCA CGGCACTCAA
GCGCTCGACG GCCTGGTCCG GAGCGGCCCC GCGCGTCGGA CGGCTCTCGA GGTCGAGGCC
GCCCAGCAGC TCGTCGACCC GGCTGACCGG GAGGCCGCGG CACGTCGCCA GCGTCCCGAC
GATGCGCGCA GGACGCTGGC AGGCCGCGTC GCGCTGAGGC TGCTGGTCGC CGCGCGCCTG
GGTGTGCCGT TGAGCCTGGC GCCGCAGATC GTCGTGGACA GGACCTGCAG CACCTGTCAC
CTGCCGCACG GTCGCCCGCG CGTCGCGGGG CTGTCGGTGA GCACGTCGAG CTCTGAGCAG
CGGGTGCTGG TCGCCGTCGC CGACGAGGGG ACGGAGGTGG GTGTGGACAT CGAGCGTGTC
CCGTCGACGG TCTTCGACGG CTTCGACGAC TTCGTGCTGC ACCCCGACGA GCGAGAGCGC
TTCGGTCCGG TGACGCGCGG GGCCTCGGGG ACTGCTGCTC GTCTGTCGTG CTGGGTCGAG
AAGGAAGCCG TGCTCAAGGC CGTGGGCGTC GGTCTGGCGT CACCACCTCA CGAGCTCCTC
CTCGCAGCGC GTCCTGACGA CGCAGTGCTG CCGACACGCG CCGACATGAT CGGCCCGTGG
GAGTGGCGGC TCGTCGAGCA GGCGGGAGCG GCCGAGGCAC TCGGGCTGTC CGTCACCGAG
CTCCCGACGG AGCCTGGCTA CAGGTCCGCG ATCGCAGCGC GTGTTCCGGC GCGGATCCAT
GCCGTCGACA TCACCAGCAT CGCGATGCAG ATCGCATCAT CTGAGGGCTT GAGGGCTTGA
 
Protein sequence
MITLLDASVD DVLAACGRLS AAGALVGGAV PSVQRASSVD RASSVDLASS VDRASSGDQA 
SSIHRASSVE RALPGHPALT VDSALLGDQA FPDQQASTDQ TAAAVCPTSG GVAALGHGTQ
ALDGLVRSGP ARRTALEVEA AQQLVDPADR EAAARRQRPD DARRTLAGRV ALRLLVAARL
GVPLSLAPQI VVDRTCSTCH LPHGRPRVAG LSVSTSSSEQ RVLVAVADEG TEVGVDIERV
PSTVFDGFDD FVLHPDERER FGPVTRGASG TAARLSCWVE KEAVLKAVGV GLASPPHELL
LAARPDDAVL PTRADMIGPW EWRLVEQAGA AEALGLSVTE LPTEPGYRSA IAARVPARIH
AVDITSIAMQ IASSEGLRA