| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19140 |
|---|
| Symbol | |
|---|
| ID | 8633549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2125339 |
|---|
| End bp | 2126931 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003314673 |
|---|
| Protein GI | 269795218 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.846076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.184811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCGA GCCACTCTCC TGCCGACCTG ACGAACCGCG TCGCGGACCT CGTCGCCAGC
GGCATGCCGT GGTGGCGGGC GCGCTCAGAG ATCCTGGACG AGCTCCTCGA CGAGGTCGTC
GCGTCCGACC GTGCGATCGC CTCAGCCCAC GCCCGACGCG TCAGAGCCAT CGAGGCTGCT
CGCACCTGGG CCGTCGACTC TGCGCGGGAG CTGGACCCAG CGCTCGGGCC CGTCGACCCC
GAGGACCGCG AGCGCGCGGC CGCGATCCGC TCGGGGCGGT CGTACGCCCG AAAGTCCGTC
ACGCTCGAGA TGGCGTGCGC AACCCGCACC CCTGAGGTCA CGATGGACGG TCTGGTCCAC
GAGGCAGAGG TGCTGGTCGA CCATCACCCG GCGACGCTCG AGGCTCTCGG GGAGGGCGAC
ATCACCTACC GCCACGTCGG CGCGATCCTG GATGCCACGA CGACCCTCGA GCCCGATGAC
TGCCAGACGC TCGAGGCTGT CCTCGTCGAG CGCGCGAAGA TCACGACGGT GTCGGCGCTG
CGGAGGTACG CGCGGCGGCA GCGGGAGCAG GCTCATCCGC GAGCACTGGA GGACCGTCAC
CGGGAGCGGT TCCTCGAGCG GCGGGTCGAG ACCGAGCCAG CCCACGACGG CATGATGTGG
CTGCACCAGT ACCTCCCTGC GGGGCAGGCG ACCGCCATCT ACAACCGTCT GACCGACACA
GCCGCCAGCC TCCAGGGCCC AGACGACCCG CGGACGCTCG CACAGCTGCG AGCTGATGTG
TTCAGCGCAC TCCTCCTCGA CGACGACATC TCGACACAGC ACTCTCCGTC CGGTGTCCCG
TGCCGCATCA GCTCCGGCTC TGGCTCTGGC TCTGGCTCTG GCTCTGGCTC TGGCTCTGGC
TCTGGCTCTG GCTCTGGCTC TGGCTCTGGC TCTGGCGGAG CATCCGCGGA GGACATCGAC
GTGTCCACCC CGTCGTCGGG CCTGCCGTCG ATGCGGGGCA TCCGGCCGAC GGTCGCCGTG
ACCGTCCCCG TCATGACTCT GCTGGGTGCC TCAGAGGAGC CCGGCCACCT CGAGGGCTAC
GGTCCGATCG ATGCCCCCAC GGCACGGGAC CTCGCCGCGC GTGCCCCGTC GTTCACCCGC
ATCCTGACCC ACCCCGAGAC CGGGGTGGTC CTCTCTGTCG GACGAGACGC CTACACCGTG
CCGGCCGACC TCAAACGGTG GCTCCGACTA CGGGACGAGA CGTGCCGGTT CCCCGGCTGC
CAACGTCGAG CGGCGCGCTG CGACATCGAC CACGTGGTCG ACTGGGCCTA CGACGGCACC
ACCGCCCACG ACAACCTCAT CCACCTGTGT CGGCACCACC ACCGCGTCAA GCACCAGACC
CGGTGGACGG TCAGCATGCG CCCCGGTGGG CTCGGCAGAC CGAACGGGAT CGCAGCCTGG
TCCTCGCCGA CCGGTCGGAC CTACACCGAC CATCCCGCAC TCGAGCTCCC CGCCCCCGAC
GAGGTGCGCA GCTCACGCGG GGCGAGACCC TTCAGCACAG CACACGCACC TCCCGACCCG
GGGAGTTCCT TCGCCGACGA CCCACCGTTC TGA
|
|---|
| Protein sequence | MRSSHSPADL TNRVADLVAS GMPWWRARSE ILDELLDEVV ASDRAIASAH ARRVRAIEAA
RTWAVDSARE LDPALGPVDP EDRERAAAIR SGRSYARKSV TLEMACATRT PEVTMDGLVH
EAEVLVDHHP ATLEALGEGD ITYRHVGAIL DATTTLEPDD CQTLEAVLVE RAKITTVSAL
RRYARRQREQ AHPRALEDRH RERFLERRVE TEPAHDGMMW LHQYLPAGQA TAIYNRLTDT
AASLQGPDDP RTLAQLRADV FSALLLDDDI STQHSPSGVP CRISSGSGSG SGSGSGSGSG
SGSGSGSGSG SGGASAEDID VSTPSSGLPS MRGIRPTVAV TVPVMTLLGA SEEPGHLEGY
GPIDAPTARD LAARAPSFTR ILTHPETGVV LSVGRDAYTV PADLKRWLRL RDETCRFPGC
QRRAARCDID HVVDWAYDGT TAHDNLIHLC RHHHRVKHQT RWTVSMRPGG LGRPNGIAAW
SSPTGRTYTD HPALELPAPD EVRSSRGARP FSTAHAPPDP GSSFADDPPF
|
|---|
| |