| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19080 |
|---|
| Symbol | |
|---|
| ID | 8633543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2119879 |
|---|
| End bp | 2120922 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| Protein accession | YP_003314667 |
|---|
| Protein GI | 269795212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.895091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.13403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG CCGCCAGCAC GTCCCGCGCA CCCCGCCTGA TCGCGCTCTC GAGCGCCGCG
CTCCTCACCC TCGGCCTCGC CGCGTGCTCG TCCGACGCAC CGGCCGAGGA GTCCACCAGC
GCGGCGGGCT TCGAGCCCAT CGTCATCGAG CACGCCCTGG GCACCACGAC CATCGAGTCG
AAGCCCGAGC GCGTCGCCAC GGTCCAGTGG GCCAACCACG AGGTCCCCCT CGCCCTGGGC
GTCGTGCCCG TCGGCATGGC CGCCGCGAAC TTCGGCGACG ACGACGGCGA CGGCCTGCTC
CCCTGGGTCG ACGAGAAGCT CGAGGAGCTC GGCGCCGAGA CGCCCGTCCT CTTCGACGAG
ACCGACGGCA TCGACTTCGA GGCCGTGGCC GACACGAACC CCGACGTCAT CCTCGCCGCG
TACTCCGGCC TCACGCAGGA GGACTACGAC ACCCTCAGCG AGATCGCGCC GGTCGTCGCC
TTCCCCGAGA CCGCCTGGGG CACCTCGTGG CGCGACATGA TCCACCTCAA CGCCGAGGCC
ATGGGCATGG CCGACGAGGG CGACGCCCTC GTCACCGAGC TCGAGGACGA GATCACCGAG
AAGGCCGCCG CGTACCCGCA GCTCGAGGGC ACCTCCGCGA TGTTCCTCAC CCACGTGGAC
ACCACCGACC TCAGCCAGGT GAGCTTCTAC ACCTCGCACG ACACCCGCGC CATGTTCTTC
GAGGACATCG GCCTCACCAC CCCCGAGAGC ATCGCGACCG CGACGGCCTC GACCGACCTG
TTCGCCCTCA CGCAGAGCGC CGAGCAGGCC GACGCGTTCA GCGACGTCGA CCTCATCGTC
ACCTACGGCG GCGACGAGCT CGTGACCGCC CTCGAGGCCG ACCCGCTGCT CTCGCAGGTC
CCCGCCGTCG CCAACGGCTC GATCGTCAAC CTGCCCGGCA CCAGCCCGCT CGGCACCGCC
GCGAACCCGA CGCCGCTGTC CATCTCCTGG ATCCTCGACG ACTACCTCGA GCTGCTCGGC
GCAGCAGCCG ACAACGCGAA GTGA
|
|---|
| Protein sequence | MTRAASTSRA PRLIALSSAA LLTLGLAACS SDAPAEESTS AAGFEPIVIE HALGTTTIES
KPERVATVQW ANHEVPLALG VVPVGMAAAN FGDDDGDGLL PWVDEKLEEL GAETPVLFDE
TDGIDFEAVA DTNPDVILAA YSGLTQEDYD TLSEIAPVVA FPETAWGTSW RDMIHLNAEA
MGMADEGDAL VTELEDEITE KAAAYPQLEG TSAMFLTHVD TTDLSQVSFY TSHDTRAMFF
EDIGLTTPES IATATASTDL FALTQSAEQA DAFSDVDLIV TYGGDELVTA LEADPLLSQV
PAVANGSIVN LPGTSPLGTA ANPTPLSISW ILDDYLELLG AAADNAK
|
|---|
| |