Gene Sked_19020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19020 
Symbol 
ID8633537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2113528 
End bp2114847 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314661 
Protein GI269795206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.146174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC TGACGAGCGT GAGCGCACAG CGGTCGTCGC GCACCCCCTC CTACCGCACC 
GCGGGCCAGT GGGTCGCCGC CGTCACCACA GCGGTCCTGG CGACCTCGGC CTCGTCGTGC
AGCACGCCGG ACGCGTCGGT CTCCGACGCC TACGCGTTCC TCGACCTCGC GATGGACACC
TGCGGACGCG GTGACCAGCT GCGGCTGCCG CCGAGCTACC TCAGCGGCGT CCCCGCAGCC
GACGCCCCCG AGGCGTCCTA CGTGTACGAC GTCGCCGTCA CCACGATCGC GTACACGGCC
CGCGGCACCG ACGAGGACCT CGGCCGCGCG CGCACCCTCG CCGCGTCGCT CGTCTCCCTG
CAGGGCTCCG ACCCCGACGG CGACGGCCGC CTGCGCAACG CCTACCCGTG CACCGCACCG
GCCGACAGCT CGCAGGCGCT CACCGACGCC AGCAGCACCG GGAACATGGC GTGGGCCGGC
CTCGCGCAGC TGCAGGTCTA CGCAGCCGCC GACGACAGCA CGGCCGACGC CGCGACGCCC
GATACCGCTG TGCTCGACGC CGCCGTCCGG CTGGGCACCT GGATCCACGA CGTCACCGCA
GACGACCGCG GCACCGGCGG GTACACCGGC GGCCTCGCCG CCGACGGCAC ACCGATCCTG
TGGAAGTCGA CCGAGCACAA CATCGACGTC GCCGCGTTCT TCCTCATGCT CGCCTCCGCG
ACCGGAGACC CGGTGTGGTC CGAGCGCGCG CAGTCGGCGC TGGCGGTCGT CACCTCCCTC
CAGGACCCTG CGACCGGGCA CTACTGGGTG GGGACCGGCA CCGACGGCGA GACCACCAAC
ACCGACGACT ACGTCCCCGA GGACGTGCAG TCCTGGGCGT CGCTCGTCCT GCCCGGCGAC
GCCACCTCCC GCGCCCTCGA CTGGGCCAGC GAGAACCTCC TCGTCGGCGG CGACGACGCC
CGGGGCGCGA AGGTCGGCGA CGGCGCCGAC CCGACCGAGA CCGTCTGGTA CGAGGGCACC
GCCCACCTCG CCTGCGCCCT GCGGGTCCGG GGCCTCGAGC GCGACGCAGC GCTCGCCGAC
GAGCTCCTCG ACACCCTCCG CGACGCGCAG CGCGCACCGC AGACGTCCTC GTCCGCCCCG
TCCCTCACCG ACGGCCAGTC CTCCTCGGGC GTCGCACCGC GGGGAGTCCC CGCCGCGTCC
CAGGACGGCA CGGCCGGCGG CGACAGCACC ATCTACGACG CCCTGCACAC GGGCACGACC
GCATGGTTCG TGCTCGCGGC ACAGGGCTCC GACCCCTTCA GCGACGACGG CCGCACCTAG
 
Protein sequence
MATLTSVSAQ RSSRTPSYRT AGQWVAAVTT AVLATSASSC STPDASVSDA YAFLDLAMDT 
CGRGDQLRLP PSYLSGVPAA DAPEASYVYD VAVTTIAYTA RGTDEDLGRA RTLAASLVSL
QGSDPDGDGR LRNAYPCTAP ADSSQALTDA SSTGNMAWAG LAQLQVYAAA DDSTADAATP
DTAVLDAAVR LGTWIHDVTA DDRGTGGYTG GLAADGTPIL WKSTEHNIDV AAFFLMLASA
TGDPVWSERA QSALAVVTSL QDPATGHYWV GTGTDGETTN TDDYVPEDVQ SWASLVLPGD
ATSRALDWAS ENLLVGGDDA RGAKVGDGAD PTETVWYEGT AHLACALRVR GLERDAALAD
ELLDTLRDAQ RAPQTSSSAP SLTDGQSSSG VAPRGVPAAS QDGTAGGDST IYDALHTGTT
AWFVLAAQGS DPFSDDGRT