Gene Sked_18890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18890 
Symbol 
ID8633524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2096941 
End bp2097741 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content73% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003314648 
Protein GI269795193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.231649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.337181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG CACCCCTCGC CGCACCGCTC GAGGCGCAGC GCAGCACCAG ACCCATGGTG 
ATCGCGCACC GCGGCAGCTC GTCCCTCGCC CCGCAGAACA CGCTCGCCGC CTTCGAGTCG
GCATGGCGCA GCGGGGCGGA CAGCATCGAG ATCGACATCC AGCTCGACGC CGACGGCGCT
CCCGTGGTCA TCCACGACGA CACCGTCGAC GCGACGACCA ACGGGTCGGG TGCCGTGGCC
GAGATGCACT CGGACGAGCT GCGTCGCCTC GACGCCGGGT CGTGGTTCTC CCCCGCCTAC
GCGGGTCAGC GGATCCCGAC CTTCGACGAG GTGCTCGAGC TGCTCGTCGC CCGCGAGGGC
ATCGAGCTGC TGCTCGAGCT CAAGGGCGAC TGGGACGCTG CCGGGGTGCA GGTCGCGGTC
GACGCGATCC GCGCGGCCGG TCTGACCGGC CGCGTCCTGG CGCAGAGCTT CTCGCGGGAG
ACCGTCGCCG CGCTGCGCGA CGTGGCACCC GAGATGCGTC GTGGGCTGCT CGTCTTCGAG
GTCGACCACA CGCTGCTCGA CGTGTGCGCC GAGCTCGGGG TCGTCGCGTG CAACCCGCAC
GGCGGCCTGC TCCTCGACGA CCAGACGCTG CTCCCGCGCC TGCAGGCGGC CGGCGTCCAG
GTCATGGTGT GGACGGCCAA CGAGCCCGAG CACTGGGCGC TCCTCGTCGA GGCCCGCGTC
GACGCGATCA TCACCGACCG CCCGGACGCC CTCGTCGGCT GGCTCTCGGC CACCGGCGCG
GCGCCGTCAC CGCGAGGCTG A
 
Protein sequence
MTTAPLAAPL EAQRSTRPMV IAHRGSSSLA PQNTLAAFES AWRSGADSIE IDIQLDADGA 
PVVIHDDTVD ATTNGSGAVA EMHSDELRRL DAGSWFSPAY AGQRIPTFDE VLELLVAREG
IELLLELKGD WDAAGVQVAV DAIRAAGLTG RVLAQSFSRE TVAALRDVAP EMRRGLLVFE
VDHTLLDVCA ELGVVACNPH GGLLLDDQTL LPRLQAAGVQ VMVWTANEPE HWALLVEARV
DAIITDRPDA LVGWLSATGA APSPRG