Gene Sked_18820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18820 
Symbol 
ID8633517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand- 
Start bp2088893 
End bp2089570 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003314641 
Protein GI269795186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.348199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.343375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCCGGCCAC CGCCCGCAAG CGCGGACGGC CCGCCGCCCA CGAGCGCGAC 
GCCCGCCGCG ACGAGATCCT GCGCGCCGCC ACCACGACCT TCCTCGCGCA CGGGTACTCC 
GCCACCACGC TCGACCAGAT CGCCACCGCC GCACAGGTCA CCAAGCGCAC CGTCTACACC 
TACGTCGGCG ACAAGGCAGC CGTCTTCACC GCCGTCGTCG ACCAGCTCCA CCGCGACGTC 
ATCGCCCAGG GCGCACCGGT GAACCAGACA GGGCACGACG CAGATCAGAC CCCCAGCACC 
ACGCTCCTCG ACCTCTGCAC CCGCATCGTC GACACCCTGC ACTCCGACCA CGGCACCGGC 
CTGCACCGCC TGGTGATCGC CGAGGCCCCA GGCTTCCCCG ACCTCGCCGC CACCTTCTAC 
GCGACGGGAC CGGAACGGTA CGTCGCCGCG CTCGCGGACG CGCTCCGGGC GCGCGGCACG 
TCGACGGACG GGGCTCTGTC GCCGGGCGGG GCCCCGGTCG GTACCGCGAC GGCCGAGAGC 
CTCTTCGGGC TGCTGCTCGG CGAGGCGCAC CGGCGCAGGC TGCTCGGCCT GACCCCGGCA 
CCCTCCGCGG AGCAGGCGCG TGCCCACGCG CAGGGAGCCC TGGACGTGCT GGGTCTCGGG 
GAGGTCGCCT CCACGTAG
 
Protein sequence
MTDTPATARK RGRPAAHERD ARRDEILRAA TTTFLAHGYS ATTLDQIATA AQVTKRTVYT 
YVGDKAAVFT AVVDQLHRDV IAQGAPVNQT GHDADQTPST TLLDLCTRIV DTLHSDHGTG 
LHRLVIAEAP GFPDLAATFY ATGPERYVAA LADALRARGT STDGALSPGG APVGTATAES 
LFGLLLGEAH RRRLLGLTPA PSAEQARAHA QGALDVLGLG EVAST