| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18780 |
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| Symbol | |
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| ID | 8633513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2082988 |
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| End bp | 2083926 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
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| Protein accession | YP_003314637 |
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| Protein GI | 269795182 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00395878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.252754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGG GCTCGCTCCG GTGGCTGCGG CGCACCGCCC TCACGGTCGT GCCCGTGGTC
GTCGGGGTGG TCCTGGCCAC CTTCTTCCTG CTGCGGCTGG TCCCCGGCGG ACCGGCCGCA
GCGATCCTCG GTGACCAGGC GACCGACCAG GCCGTGGCCG ACCTCGAGGC CGAGCTCGGC
CTCGACCGGC CCCTCCTCGC CCAGCTGTGG AGCTTCGTGG TGAGCGTCGT CGTGCACGGG
GACTCGGGGA CCTCGCTCCT CTACGGCGTC CCGACACGCG ACCTGATCGT CGACCGGGTG
GGGGTCACCC TCGAGATCGT CGCCCTGTCC GTCGTCCTCA CGGTCCTGCT CGTGGTCCCG
CTCGCCCTCC TCGCGGCGCT GCACAAGGAC CGGCTGGTCG ACCACGTGGT CCGCGTGGTG
CCGGCCGTCG GGCTCGCCAT GCCGACCTTC TGGGTCGGCC TGCTGCTCAT CCTCGTCTTC
GCGGTGAACC TCGGGTGGCT GCCCGCGGGC GGCGGCGACC AGGGGCTGCG CAGCCTCGTG
CTCCCGGCCG CCGCCGTCGC CGTGTCGCTC ACCCCCGTGC TGGTCCGCAC GCTGCGCGCC
CAGCTGCTCG AGGTGCTCGA CGCCGACTTC GTCGCCACGC TCACCGCCGC CGGCCTCCCG
CGCCACCGGG TGCTGGCCCA CGTGCTGCGC AACGCAGCCC TGCCGACCGT CACGCTCTTC
GGTCTCAACA TCGCCTACAT GATCGGAGGC ACCCTCGTGG TCGAGCGCGT CTTCGCGATC
AACGGGCTCG GCGCCCTGAT GTTCGACTCG ATCGGCAGCC GCGACTTCCC GGTGGTCCAG
GGCGTCGCCC TGTTCTGCGC CGTGCTCGTG GTGCTCGTCA CCGTCCTCAC CGACCTCGTG
GTGAACCGGC TCGACCCGCG CACCCGGGTC CTCGCATGA
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| Protein sequence | MTRGSLRWLR RTALTVVPVV VGVVLATFFL LRLVPGGPAA AILGDQATDQ AVADLEAELG
LDRPLLAQLW SFVVSVVVHG DSGTSLLYGV PTRDLIVDRV GVTLEIVALS VVLTVLLVVP
LALLAALHKD RLVDHVVRVV PAVGLAMPTF WVGLLLILVF AVNLGWLPAG GGDQGLRSLV
LPAAAVAVSL TPVLVRTLRA QLLEVLDADF VATLTAAGLP RHRVLAHVLR NAALPTVTLF
GLNIAYMIGG TLVVERVFAI NGLGALMFDS IGSRDFPVVQ GVALFCAVLV VLVTVLTDLV
VNRLDPRTRV LA
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