Gene Sked_18750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18750 
Symbol 
ID8633510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2080336 
End bp2081232 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content74% 
IMG OID 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003314634 
Protein GI269795179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.371793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACG AGGGAGTCGC GGCGGACGGC ACAGACGGCG AGCACGCCCC TGTGCAGCCC 
ACGGCCCTGC TCGAGGTCCA TGACCTGAGG GTCGCGTACG GGTCGACGCA GGTGGTGCAC
GGGGTCAGCC TCCAGGTCCC GCCCGGGGGA GTGCTCGGGA TCGTCGGCGA GTCCGGGTCG
GGCAAGACCA CGGTCGCCCG GGCGATCGCC GGCGAGCTCG CACCGGCGTC GGGCGAGGTG
CTCCTCGACG GCCAGGTGCT CCCGGGGACC TCGCGCACCG TGGCCCAGCG CCGCGCGGTC
CAGGTCGTCT ACCAGGACCC CTACGCCTCG CTCAACCCGC GCATGACGGT CGGGCAGGTG
CTGCGCGAGC TGCTCACCGT GCACCGGGTG GTGCCCAAGA GCCAGGTCCG GGCGCGCAGC
CTCGAGCTGC TCGACCTCGT CCGGCTCCCG GCGCAGGCGC TCGACGCCCG CCCCCGCCAG
CTCTCCGGCG GGCAGCGGCA ACGGGTGGCG ATCGCCCGCG CCCTCGCCCT CGAGCCGCGC
GTCCTCGTCG CCGACGAGCC CACGTCGGCC CTCGACGTCT CCGTGCAGCG CACCGTCCTC
GACCTCGTCG ACGACCTGCG CGAGCGGCTC GGCCTGACCG TCGTCCTCAT CACCCACGAC
CTCGCCGTCG TCCGCAGGCT CTGCGACACG GTGGCCGTGA TGCGCGACGG GCTCGTCGTC
GAGCAGTCAC CGGCCGACGA CTTCTTCCGC GGACCCCAGC ACCCCTACAG CCGGGCGCTG
CTCGCCGCCG CGCCGCGGCT GCGCAAGGGT GGTGCCGCTG GTACCCCTGC TGGCGCAGTC
GGCTCTCCTG CTGAAGCAGC CACCCTCCCG ATCCCACCTG ACGAGGACTC CCTGTGA
 
Protein sequence
MSHEGVAADG TDGEHAPVQP TALLEVHDLR VAYGSTQVVH GVSLQVPPGG VLGIVGESGS 
GKTTVARAIA GELAPASGEV LLDGQVLPGT SRTVAQRRAV QVVYQDPYAS LNPRMTVGQV
LRELLTVHRV VPKSQVRARS LELLDLVRLP AQALDARPRQ LSGGQRQRVA IARALALEPR
VLVADEPTSA LDVSVQRTVL DLVDDLRERL GLTVVLITHD LAVVRRLCDT VAVMRDGLVV
EQSPADDFFR GPQHPYSRAL LAAAPRLRKG GAAGTPAGAV GSPAEAATLP IPPDEDSL