Gene Sked_18610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18610 
Symbol 
ID8633496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2069239 
End bp2070588 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314621 
Protein GI269795166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.2414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.348179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGG GGTCCTCGGT CGCCGAGCGC TCCCGGGCCG CGCGGGCCGC CGCCCGGTGG 
TCGGCCGCCC CGGCGGTCCG GTGGGAGCGC GACGGCGTGG TCGTCGTCAG CGCGCTCGTC
GGCGTCGTGC TGCTCTGCGC AGGCCTCGCA GCCGGACGGC CCCAGGCGGT CGCCATCGCG
GTCCCGCTCG TGCTCTCTGC CGCCTGGGCG GCCGCGAACC GGCCCTCGGG ACCGTTCACG
GTCTCGACCG GCAGCGGGAG CACCACGGTC CGTGACCGGG AGCTCGCCGT CGCGCTGACC
CTCACGGTCC CCCACGGCGT GGACCTCGTG CGGGTGCGGG CGGAGAGCCC CGGCAACGAC
CCGGTCGACG CGCTCGTCAG CGTCCCGGAC GGCACCAGGA CCCTCGACCT CACGACGCCG
TCGGTGCGGA CCGGCCCCCG CGAGCTGTTC ACGGTCGACG CCGTGCCGGT GGCGGCCGAG
GGCGGCTGGT TCCTCGACCC CCTGCACCTC GAGCCCGACC ACGTGCTGGT GCTGCCGCTC
GTGCGGCGTC TCGACGTGGT GCCCGTCGCC TCGCAGCTGC GCGGCCTGAC CGGGCCGCAC
AGCTCGCGCC GCCCGGGCGA CGGGTCGCAG CTGCGTGACA TCGCCCTGTT CCGCGCGGGC
GACTCGGTGC GCCGGGTCGA CTGGCGGACC ACCGCGCGAC GCTCTCCCGA CGTCTCCGAG
CTCTACGTCC GTCGCACCTT CGCCGCGTCC GAGGCGTCGG TGGTGCTCGT GCTCGACTCG
CGCGACGACG TCGGCCCTGA GGTCTCCACC TGGGGCGGGT ACCGCGAGAC CGCGCCCGAC
GTCCAGACCT CGCTCGACAT CGCGCGCGAG GCTGCGGCGA CCGTCGGGAC GGCTGTCGTC
GACGGCGGGG ACAGGCTCGG CTTCGAGGAC CTCGGGCGGC TGCACACCCC CGTCCCGCTC
TCCGGGGGCA AGCGCCACCT GCAACGCGTG GTCCACGCCC TCGCCCTGGC CCGTCCGGCC
GGCGCCCCGA AGCACCGGGA ACGCCCACCC CAGCTCCCGA CGGGCGCGAT GGTCTACCTG
TTCTCGACTT TCCTCGACGA CTCGCCCTCG CGGACCGCCC TCGCGTGGCG TGCCCTCGGG
CACCGCGTGG TGGCTGTCGA CACGCTCCCC CAGGAGGTCC TGCGCGGCCT CGACCGGCAC
GAGCTGCTGG CCTGGCGTCT CAACGACATC GTCCGTCGCG ACCGGCTGCA CGAGCTCTCG
CGCGCCGGCG TCACGGTGCT GCGGTGGGCG ACGGGTGAGC CCGCGGTCGC GCTGCGTGCC
GAGGCCCGTG CGCTGCGAGG CCACTCGTGA
 
Protein sequence
MTRGSSVAER SRAARAAARW SAAPAVRWER DGVVVVSALV GVVLLCAGLA AGRPQAVAIA 
VPLVLSAAWA AANRPSGPFT VSTGSGSTTV RDRELAVALT LTVPHGVDLV RVRAESPGND
PVDALVSVPD GTRTLDLTTP SVRTGPRELF TVDAVPVAAE GGWFLDPLHL EPDHVLVLPL
VRRLDVVPVA SQLRGLTGPH SSRRPGDGSQ LRDIALFRAG DSVRRVDWRT TARRSPDVSE
LYVRRTFAAS EASVVLVLDS RDDVGPEVST WGGYRETAPD VQTSLDIARE AAATVGTAVV
DGGDRLGFED LGRLHTPVPL SGGKRHLQRV VHALALARPA GAPKHRERPP QLPTGAMVYL
FSTFLDDSPS RTALAWRALG HRVVAVDTLP QEVLRGLDRH ELLAWRLNDI VRRDRLHELS
RAGVTVLRWA TGEPAVALRA EARALRGHS