Gene Sked_18330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18330 
Symbol 
ID8633468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2040573 
End bp2041826 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID 
Productphosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 
Protein accessionYP_003314593 
Protein GI269795138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.290934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGACC TCGAGCACAC CGCGATCCGA TTTGCGCAGA AGACGCTCAA GCGAGCCATC 
GTGCTCTCCG CCGTCACCCC CTTCGTCGTG GCCGGCGGCG TCGTCGCGCT CGACCACTGG
TCCAAGCGCA AGAAGTCGCG CAAGGCGGTG TTCCCCCACG CCAAGCCCGT GAGCTCCACG
GTCGAGACGA CCGGCACGAC GATCTACACC TTCGGCGAGG ACCTCTACGC CGCGATGCTC
GAGGCCATCG AGGGCGCCAC CGAGCGGATC TTCATCGAGA CGTACATCTG GAAGGGCGAC
GAGGTCGGCC GCCAGTTCAA GGACGCGCTG ATCGCCGCCT CCGAGCGCGG CGTCGAGGTC
TTCGTCGTGT ACGACGGCTT CGCCAACGCC GTGGTCCCCC GGTCCTTCTT CAGGTTCCCC
GAGGGCATCC ACGTCCTCGA GTACCCGCTC TTCCGGCCGC AGGTCCTCCT CATGGACCTC
AAGCACACGG GTCGAGACCA CCGCAAGATC CTCGTCGTCG ACGACGAGGT CGGGTTCGTC
GGCGGCTACA ACATCGGCAC CCTCTACGCG ACGCAGTGGC GCGACACGCA CCTGCGCGTC
ACCGGCACCG CCGTGTGGGA GCTCTCGAGC GCCTTCATCG ACTTCTGGAA CCTCAACCGG
CGCCGCCACC ACCCGTCGAT CGACTCCCCC GGCACCATCA CCTGGGTCCC CGGCTTCCAG
GCCGCCCGCA ACGCCCCGGC GCGCCGCGTC TACCCCATCC GCAACCTGTA CCTCGAGGCC
TTCCGCCGCG CCACGAGCCA CATCTACCTC ACGCAGGCTT ACTTCATCCC GGACCGCGAG
CTCCTCGAGG TGCTCGTCGC TGCCGCGCGT CGTGGGGTGG ACGTGCGGCT CATCGTGCCC
GAGGCCTCCA ACCACGTCCT TACCGACTGG CTCTCGCGTG GGCTCTACTC GCAGATGCTC
CGCGCCGGCG TCACCATCTG GCTGTACCGC AACGCCATGG TCCACGCCAA GACCGCCACG
GTCGACGGAC GCTGGACGAC CATCGGGACC GCGAACATCG ACCGGCTCAG CCTCACCGGC
AACTACGAGA TCAACATGGC GATCTACGAC GAGGGCATCG CCGCGCAGAT GGAAGACATC
TTCACGCTCG ACCTCACCAA CTGCCGCGAG CTCCACCTCG ACGAGTGGGA GGCCCGCTCC
CCCGTCGCCA AGATCGGCGA GCTGCTGCTC ACCCCGCTGA GCCCGCTGCT CTGA
 
Protein sequence
MEDLEHTAIR FAQKTLKRAI VLSAVTPFVV AGGVVALDHW SKRKKSRKAV FPHAKPVSST 
VETTGTTIYT FGEDLYAAML EAIEGATERI FIETYIWKGD EVGRQFKDAL IAASERGVEV
FVVYDGFANA VVPRSFFRFP EGIHVLEYPL FRPQVLLMDL KHTGRDHRKI LVVDDEVGFV
GGYNIGTLYA TQWRDTHLRV TGTAVWELSS AFIDFWNLNR RRHHPSIDSP GTITWVPGFQ
AARNAPARRV YPIRNLYLEA FRRATSHIYL TQAYFIPDRE LLEVLVAAAR RGVDVRLIVP
EASNHVLTDW LSRGLYSQML RAGVTIWLYR NAMVHAKTAT VDGRWTTIGT ANIDRLSLTG
NYEINMAIYD EGIAAQMEDI FTLDLTNCRE LHLDEWEARS PVAKIGELLL TPLSPLL