Gene Sked_18250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18250 
Symbol 
ID8633460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2031588 
End bp2032898 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314585 
Protein GI269795130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.72942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG TGCCCCGCAC CCCCGACGAG CCCCGTGACC AGCCGTCCGA CGACCAGGTG 
ACGGGCGACC AGGTGACGGG CGACGAGCCC CAGGGAGAGG GCACCCAGAT CGTGGACCCA
CAGGTCGACG AGGCGCCGGC GACCCCAGAG GAGCCCGCCG CCCGGCCGCC GTCGATCCCG
GTCGGCTCTG CCGCGCCGAG GCCGCGCTCC GAGACCCACC CGGACACCGA CGAGATCGAG
GTCGTCCTCC CGCTGAGCGT CGTGCGCGTC GTCCCGGGGG TGCCGTCCGG GTCCGACGGC
TCGGCGCGCC CGACCGGGTC CCGTCCCGCC CCCGGCGAGC GCCCCGACAC CGGACGCCCT
GCACGCGCCC CGCGCCCCGC GCCGTCCAGC CGGCCGGGAC CACCTGCGCG CCCCTCGGCC
ACCGGAGGAG TCCAGCCTGG CGTCAGCGCA GCGACCGACG GCACCGGGTC GAAGACCACC
GGACCCCAGG GCACGGGCAC CGACGGCTCC GCGACGACCG CCGCTGCCAC CGGCACGACC
TCCTCCACGC CGCCCCGGAC GCCCGAGGAG GCCCGCCGTG CGGCGCGCGC CGCGATGAGC
CCGGGCCAGC GCTTCCGCTC GGCCTTCCGG CCGCGGATGA CGCGTGCCCA GGGGCTCGCG
GCCGTGCTGT GCGCCGTCCT CGGCTTCGCG CTCGTGGTCC AGCTCCAGCA GAACCAGCAG
GACGAGTTCT CCGGGCTCCG CCAGTCCGAC CTCGTCCGCA TCCTCGACGA CGTGAGCAAG
CGCTCCGACA GCCTCGAGCG CGAGGCGACG TCCCTGCGCG AGTCGGAGTT CGAGCTGCGC
TCGGGCAGCG ACTCCCAGCA GGCTGCCCTC GAGCTCGCCG AGAAGAACGC GGAGATCCAG
GGCATCCTCT CCGGGCGCCT GCCGGCCGAG GGGCCGGGGC TCGAGCTGCA GATCGTGCAG
GGGGACAGCC CGATCTCTGC GGCGCGGCTG TTCAACGTGC TCGAGGAGCT CCGCAACGCC
GGCGCCGAGG CGATCGACGT CAACGGCATC CGGATGGTCA CGTCCAGCCA CTTCGAGGAC
ACCGGGACGG GGGTGTCCAT CGACGGCATC GTGGTGTCCC CGCCCTACCG GTGGACGGTC
ATCGGCGACC CGCAGACCCT CGAGCCCGCG ATGGCGATCC CCGGCGGCGC GGTGGCCTCG
ATCACCACGA GCGGGGGCCG GACGACCATC GAGCAGAAGG AGCTCGTCCA GATCCGCTCG
GTCCGCGACC CGTCCGAACC GCGCTTCGCG ACACCGGCGA CCGACCAGTG A
 
Protein sequence
MSSVPRTPDE PRDQPSDDQV TGDQVTGDEP QGEGTQIVDP QVDEAPATPE EPAARPPSIP 
VGSAAPRPRS ETHPDTDEIE VVLPLSVVRV VPGVPSGSDG SARPTGSRPA PGERPDTGRP
ARAPRPAPSS RPGPPARPSA TGGVQPGVSA ATDGTGSKTT GPQGTGTDGS ATTAAATGTT
SSTPPRTPEE ARRAARAAMS PGQRFRSAFR PRMTRAQGLA AVLCAVLGFA LVVQLQQNQQ
DEFSGLRQSD LVRILDDVSK RSDSLEREAT SLRESEFELR SGSDSQQAAL ELAEKNAEIQ
GILSGRLPAE GPGLELQIVQ GDSPISAARL FNVLEELRNA GAEAIDVNGI RMVTSSHFED
TGTGVSIDGI VVSPPYRWTV IGDPQTLEPA MAIPGGAVAS ITTSGGRTTI EQKELVQIRS
VRDPSEPRFA TPATDQ