| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18010 |
|---|
| Symbol | |
|---|
| ID | 8633437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2009719 |
|---|
| End bp | 2010645 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| Protein accession | YP_003314562 |
|---|
| Protein GI | 269795107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0200906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCA CCCCACCCGC AGGCCAGACC GGCAGCCGCA CCCCCTTCGG GGTGCGGCTC
GCCGCGGCCA TGGCCGAGCA CGGCCCGCTC TGCGCCGGCA TCGACCCGCA CCCCGGGCTC
CTCGCCGCGT GGGGTCTGGC TGACGACGTC GCTGGCCTGC GTACCTTCGC ACTCACCGTG
GTCGATGCGC TCGGCGGGCG GGTCGCGGCC CTCAAGCCGC AGTCCGCGCT GTTCGAGCGC
CACGGCTCCC GCGGCGTCGC CGTGCTCGAA GAGGTCGTCG CCGCGGCCCG CGAGGTCGGC
ACACTGACGA TCGTCGATGC CAAGCGGGGC GACATCGGGT CGACCATGGC CGGCTACGCC
GAGGCGTACC TGGCCGACGG GTCACCGTTG GCCGGCGACG CACTCACCGT GTCGCCGTTC
CTCGGTGCCG GGTCGCTCGC ACCAGCCGTC GACCTCGCGC TCGCCACCGG CCGAGGGCTC
TTCGTGCTCT GCCTGACCTC CAACCCCGAG GGGCGCGAGG TCCAGCACGC ACGGACCGCC
GACGGCGAGA GCGTCGCCGC CCAGGTGGCA CGCTTCGCAG CCGAGGCCAA CGCCGTCGAG
CTCTCGGGGC TCTCTTCCGG CGCGGCTGGC TCAGCACGGG GGAGCGGGGC CCTCGGGTCC
GTCGGGCTCG TGGTCGGCGC CACGATCGGC GACGCCGCCC GCATCACGGG CGTCGACCTG
GCCGCGGTCC GGGGCCCGCT CCTCGCACCC GGCGTCGGCG CGCAGGGCGC CGGTGCGCCC
GAGCTCGCCG CGGTGTTCGG CGACGCCCGG TCGCAGGTCC TCGCGTCCTC CTCCCGCGGC
GTCCTCGCTG CAGGGCCCGA CGTGGCGGCC CTGCGAGCCG CAGCCCGCCA GGCCGCCGCC
GACGCCCGCA GCGCGCTCGT CGGCTGA
|
|---|
| Protein sequence | MTGTPPAGQT GSRTPFGVRL AAAMAEHGPL CAGIDPHPGL LAAWGLADDV AGLRTFALTV
VDALGGRVAA LKPQSALFER HGSRGVAVLE EVVAAAREVG TLTIVDAKRG DIGSTMAGYA
EAYLADGSPL AGDALTVSPF LGAGSLAPAV DLALATGRGL FVLCLTSNPE GREVQHARTA
DGESVAAQVA RFAAEANAVE LSGLSSGAAG SARGSGALGS VGLVVGATIG DAARITGVDL
AAVRGPLLAP GVGAQGAGAP ELAAVFGDAR SQVLASSSRG VLAAGPDVAA LRAAARQAAA
DARSALVG
|
|---|
| |