| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17970 |
|---|
| Symbol | |
|---|
| ID | 8633433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2003227 |
|---|
| End bp | 2004573 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_003314558 |
|---|
| Protein GI | 269795103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA GGTACCTCCT CTCCCACGTG TCGCCCCTCG GCGGCGACCG TGTCGACATG
GTCCTCGCCG ACGGGGTCGT CGAGGCTGTC GCTCCCGCCG GCACGCTCAC CGCAGACGCC
AGCGGCGAGA CCGGCGAGAC CGTGGTCGTC GACTGCTCCG CCCTGGTCGC CCTGCCGGGT
CTGGTCGACC TGCACACGCA CCTGCGCGAG CCGGGCCGCG AGGACTCCGA GACCATCTCC
TCCGGGACGC GCGCCGCAGC CGTCGGCGGC TTCACCGCCG TGCACGCCAT GGCCAACACC
ACGCCCGTCC AGGACACCGC CGGCGTCGTC GAGCAGGTCT GGCGCATCGG CTCCGAGGCA
GGCTGGGCGG ACGTCCACCC GGTCGGCGCC GTCACGGTCG GGCTGGCGGG GGAGCACCTC
GCCGAGCTCG GGTCCATGGC CTCGTCGGCC GCGCAGGTCC GCGTGTTCTC CGACGACGGC
AAGTGCGTGT GGGACCCGGT CCTCATGCGC CGCGCCCTCG AGTACGTGAA GTCCTTCGAC
GGTGTCATCG CCCAGCACGC CCAGGAGCCC CGCCTCACCG AGGGCGCCCA GATGAACGAG
GGCGTCGTCT CCGCCGAGAT CGGCCTGGCC GGCTGGCCCG CCGTCGCGGA GGAGGCGATC
ATCGCCCGCG ACGTGCTGCT CGCCGAGCAC GTGGGCTCGC GCCTGCACGT GTGCCACCTG
TCGACCGCCG GTTCCGTCGA CCTCATCCGC TGGGCCAAGG CCCGGGGCAT CAACGTGACC
GCCGAGGTCA CCCCGCACCA CTTGATCCTC ACCGACGAGC TCGCCCGCGG CTACGACCCG
CTGTTCAAGG TCAACCCGCC GCTGCGCACC GCTGCCGACG TCGAGGCGGT CCGCGAGGGC
CTGGCCGACG GCACCATCGA CATCGTCGCG ACCGACCACG CCCCGCACAC CCGCGAGGAC
AAGGACTGCG AGTGGGCGGC CGCGGCCTTC GGCATGACCG GCCTCGAGAC GGCTCTCAGC
GTCGTCCAGC AGACCATGGT CGACACCGGC CGGATGACCT GGGCCGACGT CGCCCGGGTC
CTCTCGACCG CTCCGGCCCG GATCGGCAGG ATCGATCAGG GCCCGCGCCC GCAGGGCCGC
CCCCTCGAGG TCGGCGAGCC CGCCAACGTC GTGCTGGTCG ACCCGGCCGC CACCCGCACC
GTGGTCCCCG CCGAGCAGGC CACCGCGAGC GCGAACTCGC CCTTCGGCGG CTACGAGCTG
CCGGGCGCCG TCGTCGCGAC GTTCCTGCGG GGACGCGCGA CCGTCTTCGA GGGTCGTCCG
GTCGAGCAGG CGGAGGTGGC GCGGTGA
|
|---|
| Protein sequence | MTTRYLLSHV SPLGGDRVDM VLADGVVEAV APAGTLTADA SGETGETVVV DCSALVALPG
LVDLHTHLRE PGREDSETIS SGTRAAAVGG FTAVHAMANT TPVQDTAGVV EQVWRIGSEA
GWADVHPVGA VTVGLAGEHL AELGSMASSA AQVRVFSDDG KCVWDPVLMR RALEYVKSFD
GVIAQHAQEP RLTEGAQMNE GVVSAEIGLA GWPAVAEEAI IARDVLLAEH VGSRLHVCHL
STAGSVDLIR WAKARGINVT AEVTPHHLIL TDELARGYDP LFKVNPPLRT AADVEAVREG
LADGTIDIVA TDHAPHTRED KDCEWAAAAF GMTGLETALS VVQQTMVDTG RMTWADVARV
LSTAPARIGR IDQGPRPQGR PLEVGEPANV VLVDPAATRT VVPAEQATAS ANSPFGGYEL
PGAVVATFLR GRATVFEGRP VEQAEVAR
|
|---|
| |