| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17940 |
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| Symbol | |
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| ID | 8633430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2000007 |
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| End bp | 2001380 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003314555 |
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| Protein GI | 269795100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTG TCGAACGCCG CGTCCTCGTC GTCGCGATCC TCGCGTCCTT CGTCGTGTTC
CTCGACGGCT CGGTGGTCAA CGTGGCGCTG CCGGCGATCG CGGGTGAGCT CGACGGGGGA
GTCCTCGACG GGCTCGCGCT CCAGCAGTGG GTGGTCGACG CGTACCTCGT GACGCTCGGC
GCCCTCATCC TCGTCGCCGG CTCGCTCTCC GACGTCTTCG GCCGGCGGCG CGTCCTCACC
TGGGGACTGG TCGGCTTCGG CATCACCTCG CTGCTCTGCG CCCTCGCCCC GACGGGCCTC
GTACTCGTCG TAGCCCGCGC GCTCCAGGGA GCAGCAGGGG CGCTGCTCGT CCCCAGCTCC
CTCGCCATGA TCGTCGCGAC CTTCCGCGGC GAGGCCCAGG GGAAGGCGAT CGGGACCTGG
ACCGCGTGGA CCGGGACGGC GATGATCGCC GGCCCGCTCC TCGGCGGGAT CCTCGTCGAC
ACCGCCTCCT GGCGGTGGGT CTTCGCCGTG AACGTCGTGC CGGTCGCGCT CACCGTCTGG
CTGGTCCGCT CGACACCTGG GGGAGCGCGC GACACGTCAC GCCGCGTCGA CGTCGTCGGG
GCCGCGCTCG TCGCCCTCGG GCTCGCCGGG ACAGTCTTCG CGCTCATCGA GCAGGGGCGG
CTCGGGTGGT CCGCACCGCT CGTCTGGGCG CCGCTCGTGC TCGGGGTGAC CGCGCTCGTC
GCCTTCGTCC TCTGGGAACG ACGCGCCCCG GACCCCGTGC TGCCGCTGCG GCTCTTCGCC
GTCCGCAACT TCTCCGCCGG CAACCTCACG ACCGCAGCGG TCTACGGCGC GCTGGCCTTC
GGCGGCTTCG TCCTCGTGCT CTTCCTCCAG CAGGTCGCCG GCTACAGCGC GACGGCAGCC
GGGCTCTCGA TGCTCCCGGT CACCCTGCTC ATGCTCGCCC TGTCCTCCCG CGCAGGCGCC
CTGGCGGGGC GCTACGGTGC GCGGGTCTTC ATGACCGTCG GCCCGCTCGT CGCCTCCGCG
GGGTACCTGC TCATGCTCAC CACCACCGAG GAGGCCGTCT ACCTCACGCA GATCCTGCCC
GGGGTGCTGC TGTTCGGTCT CGGGCTGGCA GCGACCGTCG CGCCGCTCAC CGCCGCCATC
CTCGCCTCGA TCCCGGCCGA GGACGCCGGG ATCGGCTCGG CAGTCAACAA CGCGGTCTCC
CGGGTGGCCG GGCTGGTGGT CATCGCCTGC GCCGGCGTGG TGATCGGCCC GACCCTCGAC
CTCGCCGGCT TCCACCGCGC CCTCGTCCTC ACCGCGGTCC TCCTCGCCCT CGGCGGCGTC
GTCAGCTGGC TCGGCATCCG CGACGGTGCC CGTGCGCCTG ACCGGGCTCC CTGA
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| Protein sequence | MTTVERRVLV VAILASFVVF LDGSVVNVAL PAIAGELDGG VLDGLALQQW VVDAYLVTLG
ALILVAGSLS DVFGRRRVLT WGLVGFGITS LLCALAPTGL VLVVARALQG AAGALLVPSS
LAMIVATFRG EAQGKAIGTW TAWTGTAMIA GPLLGGILVD TASWRWVFAV NVVPVALTVW
LVRSTPGGAR DTSRRVDVVG AALVALGLAG TVFALIEQGR LGWSAPLVWA PLVLGVTALV
AFVLWERRAP DPVLPLRLFA VRNFSAGNLT TAAVYGALAF GGFVLVLFLQ QVAGYSATAA
GLSMLPVTLL MLALSSRAGA LAGRYGARVF MTVGPLVASA GYLLMLTTTE EAVYLTQILP
GVLLFGLGLA ATVAPLTAAI LASIPAEDAG IGSAVNNAVS RVAGLVVIAC AGVVIGPTLD
LAGFHRALVL TAVLLALGGV VSWLGIRDGA RAPDRAP
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