Gene Sked_17840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17840 
Symbol 
ID8633420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1990465 
End bp1991259 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314545 
Protein GI269795090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.147294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.393457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CTCAAGGAGC CTGGATCGGG CTCGCGGCCA TCGTGTGCCT CGTTCTCGCG 
GTCCTCGGGT GGTTCCTGCT CATCTCACCG CGGGTCGACG AGGAAGCGTC GATCCGCGAG
CAGGAGACCA CGCTCATCGG CGAGAACGAC GCACTCCAGC AGCGCGTTGC CGCGCTCAAG
GCTGACTTCG ACCAGATCGA CAGCTACCGG TCTGAGCTCG CCGCCACGCA GGTGAAGCTG
CCGACGCAGC CCGAGATCGA AGACATGTTC GACGAGATCG ACCTCATCGC CTCGAACAAC
GGGATCGTCA TCGACGAGAT GACGGCTGAC GCGGCCACGA GCCTCGCAGA GATGCCAGGG
TTCGCCACCA CGCCCGCTCC GGCTGCGGCG CCAGCCGAGG GGGACTCTGC TGAGCCGACC
GACGCCGAGA CGACCGAGGC GGCAGCTGAG CCTGTGGAGA CCGCGGCTCC ACCCGTGTGG
ACCCCGGACG GGGTGGACTC GCTCGTGCTC TTCCCCGTCC ACGTGTCGTT CACCGCTGGG
ATCGACCAGA CGCGCGGGTT CCTCAACGGG CTGCAGACTG GCTCGAGCCG GTACTACCTG
GCGTCCAACC CGGTCGTGAC GACCGTCGAC CCGACGCAGA TGGTGGAAGG CCAGGGGAAC
CTGGAGGTGA CGGTCACGGT CTACGCCTAC GTCTACACGG ATGTCCTCGC GGAGGCAGCA
GTCGACCCTC TCGAGGGAGT GGTCCCCGTC GACCCGTCCG AGCGTGATCC CTTCGGCGTC
GTCGTCGCCC CCTGA
 
Protein sequence
MPKTQGAWIG LAAIVCLVLA VLGWFLLISP RVDEEASIRE QETTLIGEND ALQQRVAALK 
ADFDQIDSYR SELAATQVKL PTQPEIEDMF DEIDLIASNN GIVIDEMTAD AATSLAEMPG
FATTPAPAAA PAEGDSAEPT DAETTEAAAE PVETAAPPVW TPDGVDSLVL FPVHVSFTAG
IDQTRGFLNG LQTGSSRYYL ASNPVVTTVD PTQMVEGQGN LEVTVTVYAY VYTDVLAEAA
VDPLEGVVPV DPSERDPFGV VVAP