| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17750 |
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| Symbol | |
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| ID | 8633411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1982005 |
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| End bp | 1983198 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_003314536 |
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| Protein GI | 269795081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.643822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCCC CGCCCGCAGG TGCTGGCCGT ACCGGCCTGA GCCGCCCCAC GCAGGCCGAC
GACATCGTCC TCGACGCCGT GCTGCGCATC ATGGTCGAGG CCGGGGCCTC CGACCTCCAC
CTCACGGCGG GGTCCGCCCC GAAGATCCGC GTGAACGGCT CGCTGCAGAC CGTCGACGGT
CAGCCCGAGG TCGCCTCCGA GAGCCTGCAG CGCACGCTGT ACGCGATCCT CACGCAGAAG
CAGCGCGAGA AGTTCGAGGC CAACCTCGAG CTCGACTTCT CGTACTCCGT GCGGGGCCTG
GCCCGGTTCC GTGTGAACTT CTACCAGCAG CGTGAGTCCA TCGGTGCGGC GTTCCGCCTC
ATCCCGTACG AGATCAAGCC CCTCGAAGAG CTCGGCGTCC CCCCGGTCGT CTCGAGCTTC
GCGAACCTGC CCCGCGGCCT CGTCCTCGTC GCCGGGCCCA CCGGCTCGGG CAAGTCGACG
ACGCTCGCGT CGATCATCGA CCTCGCCAAC CGGACGCGCT CCGACCACAT CATGACGGTC
GAGGACCCCA TCGAGTTCCT CCACCGCCAC AAGAAGTCGC TCATCAACCA GCGCGAGGTC
GGGGCGGACA CCCACAGCTT CGCCAACGCC CTCAAGCACG TGCTCCGCCA GGACCCCGAC
ATCATCCTGG TCGGCGAGAT GCGCGACCTC GAGACCATCT CCGTCGCGCT CACCGCCGCC
GAGACCGGCC ACCTCGTCTT CGCGACCCTG CACACGCAGG ATGCCGCGCA GACCATCGAC
CGCATCATCG ACGTGTTCCC GCCCGAGCAG CAGGGGCAGG TTCGCACCCA GCTCGGCGGA
GCCCTGCAGG GAGTGGTCTG CCAGACCCTC TGCAAGCGCT CCGACGGCCC GGGTCGCGTC
GTCGCCACCG AGGTCATGGT CGCGACGCCT GCGGTGCGCA ACCTCATCCG CGAGGGCAAG
ACCCACCAGG TGTACTCCGC GATGCAGGCT GGCAAGCAGC AGGGCATGCA CACCATGGAC
CAGCACCTTG CGGACCTCGT CCGTCAGGGA CGCATCTCCT ACGAGACCGG CCTCGAGAAG
TGCCACCACA TCGAGGACTT CAACCGGCTG AGCGGACGCT CGGGCGGATC CACAGGCGCA
GGGTTCGCCG CCGCCGGCAT GGGCGGACAG TCATACGGAG CGAGTGGTCA CTGA
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| Protein sequence | MDAPPAGAGR TGLSRPTQAD DIVLDAVLRI MVEAGASDLH LTAGSAPKIR VNGSLQTVDG
QPEVASESLQ RTLYAILTQK QREKFEANLE LDFSYSVRGL ARFRVNFYQQ RESIGAAFRL
IPYEIKPLEE LGVPPVVSSF ANLPRGLVLV AGPTGSGKST TLASIIDLAN RTRSDHIMTV
EDPIEFLHRH KKSLINQREV GADTHSFANA LKHVLRQDPD IILVGEMRDL ETISVALTAA
ETGHLVFATL HTQDAAQTID RIIDVFPPEQ QGQVRTQLGG ALQGVVCQTL CKRSDGPGRV
VATEVMVATP AVRNLIREGK THQVYSAMQA GKQQGMHTMD QHLADLVRQG RISYETGLEK
CHHIEDFNRL SGRSGGSTGA GFAAAGMGGQ SYGASGH
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