Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17660 |
Symbol | |
ID | 8633402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1971217 |
End bp | 1971834 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | SSU ribosomal protein S4P |
Protein accession | YP_003314527 |
Protein GI | 269795072 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.029171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0852313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCGTT CGCGCCGCCA GGTCCGCCTG AGCCGCGCGC TGGGCATCGC GCTCACCCCG AAGGCCGTCA AGCACTTCGA GAAGCGTCCC TACCCGCCCG GCGAGCACGG CCGTGCCCGC CGCCGCACCG AGTCGGACTA CGCGGTCCGT CTCCGTGAGA AGCAGCGTCT GCGCGCCCAG TACGGCCTCC GCGAGAAGCA GATGGCCCGT GCCTTCGAAG AGGCTCGCAA GGCTCCGGGC CTGACCGGTG AGGCGCTCGT CGAGCTCCTC GAGGTCCGTC TCGACGCCCT GGTGCTCCGT GCCGGCTTCG CCCGCACCAC GCTCCAGGCC CGCCAGGCCG TGGTCCACCG CCACATCCTC GTCGACGGCA AGATCGTCGA CCGCCCCTCG TTCAAGGTGA AGCCGGGCCA GACGGTCCAG GTCAAGCCGA AGAGCCAGTC GATGACGCCG TTCCAGGTCG CCGCTGCCGG CGCCCACCGC GACGTCCTCC CCGCCGTCCC CGGGTACCTC ACGGTCTCGC TCGAGAAGCT CTCCTTCGTG CTCTCGCGCA GCCCGAAGCG TGCCGAGGTC CCCGTGACCT GCGAGGTCCA GCTGGTCGTC GAGCACTACT CGCGCTGA
|
Protein sequence | MTRSRRQVRL SRALGIALTP KAVKHFEKRP YPPGEHGRAR RRTESDYAVR LREKQRLRAQ YGLREKQMAR AFEEARKAPG LTGEALVELL EVRLDALVLR AGFARTTLQA RQAVVHRHIL VDGKIVDRPS FKVKPGQTVQ VKPKSQSMTP FQVAAAGAHR DVLPAVPGYL TVSLEKLSFV LSRSPKRAEV PVTCEVQLVV EHYSR
|
| |