Gene Sked_17560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17560 
Symbol 
ID8633392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1956252 
End bp1957367 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content69% 
IMG OID 
Productprotein translocase subunit secF 
Protein accessionYP_003314517 
Protein GI269795062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.095972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG GATTCGCCCA GTGGGGCAAC GACCTCTACA CCGGCCGGAA GTCGTACGAC 
ATCGTCGGCA AGCGTCGCAA GTTCTACATC GCCTCCGTGG TGATCGTGCT GCTCAGCCTC
GTGGTCCTGC TGACCCGTGG GTTCAACCTC GGCATCGAGT TCCGCGGCGG CTCCGAGTTC
ACGGTGTCCG ACGTGTCGAC GCTGAGCCAG CAGGAGGCTC TCGACGCGGT GGCCAGCGTC
GCCCCGGCCG AGCAGCCGCG CATCTCGAGC GTCGGCTCGA GCGCTCTGCG GGTCCAGACC
GCCGCGCTCG ACGAGGACGA GGTCGTCGCG GTGCGCGACG CCCTCGCCGC CGCCTACGGT
GTGAGCGCCG ACGAGGTCAC CAGCTCGTTC ATCGGCCCGT CGTGGGGAGC CGACGTCTCG
GGGAAGGCCC TCACCGGCCT CGTCGTGTTC CTCGTCCTCG TCACCCTCGT CATGTCCGTG
TACTTCCGTG CGTGGCGCAT GGCGGCGGCG GCGCTCGTCG CGCTGTTCCA CGACCTCATC
ATCACGGCGG GCGTCTATGC GCTCATCGGG TGGGAGGTCA CCCCCGCGAC GGTGATCGGG
TTCCTCACCA TCCTCGGGTA CTCGATCTAC GACACCGTCG TGGTCTTCGA CAAGGTCCGG
GAGAACACCG CGGACATCAC CAAGCAGACC CGGAGCACCT ACGCCGAGCG TGCCAACCTC
GCGGTGAACC AGACCCTCGT CCGCTCGATC AACACCTCGG TGGTCGCGCT GCTCCCGGTC
GCGTCGATCC TGTTCATCGG CGCCTTCATC CTCGGCGCCG GCACCCTGCG CGACATCGCT
CTCGCGCTGT TCGTCGGCAT GGCCGTGGGC ACCTACTCGT CGATCTTCCT CGCGACGCCG
CTCGAGGTGA CCCTGCGCAT GCGCGAGCCC GCCATCGTCG AGCACACGAA GACCGTGCTC
GCCCGCCGCG CGGAGAAGGT CTCTGCCGCG GACGGCTCGG GCGACACCGG CGCCGAGGAT
GCCGAGACCT CGCAGGTCCA GTACGTCGGC CAGCTGAGCC CGGGCTCGCA CCAGGGCCAC
GCCGCACAGC CCCGCAAGCG CAAGGGATCA CGGTGA
 
Protein sequence
MAVGFAQWGN DLYTGRKSYD IVGKRRKFYI ASVVIVLLSL VVLLTRGFNL GIEFRGGSEF 
TVSDVSTLSQ QEALDAVASV APAEQPRISS VGSSALRVQT AALDEDEVVA VRDALAAAYG
VSADEVTSSF IGPSWGADVS GKALTGLVVF LVLVTLVMSV YFRAWRMAAA ALVALFHDLI
ITAGVYALIG WEVTPATVIG FLTILGYSIY DTVVVFDKVR ENTADITKQT RSTYAERANL
AVNQTLVRSI NTSVVALLPV ASILFIGAFI LGAGTLRDIA LALFVGMAVG TYSSIFLATP
LEVTLRMREP AIVEHTKTVL ARRAEKVSAA DGSGDTGAED AETSQVQYVG QLSPGSHQGH
AAQPRKRKGS R