Gene Sked_17500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17500 
Symbol 
ID8633386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1950435 
End bp1951193 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID 
Productconserved hypothetical protein TIGR01033 
Protein accessionYP_003314511 
Protein GI269795056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.268105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.267307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGTC ACTCCAAATG GGCCACCACG AAGCACAAGA AGGCGGTCAT CGACGCCAAG 
CGTGGCAAGC TCTTCGCCAA GCTCATCAAG AACATCGAGG TGGCCGCCCG CACGGGCGGC
GGTGACATCA ACGGCAACCC GACGCTCTTC GACGCGGTCC AGAAGGCCAA GAAGACCTCT
GTCCCGAACG ACAACATCGA GCGCGCGCTC AAGCGCGGCT CCGGCCAGGA GGCCGGCGGC
GCCGACTACC AGACGATCAT GTACGAGGGC TACGGCCCCG GCGGCATCGC CTTCCTCGTC
GAGTGCCTCA CCGACAACAA GAACCGCGCG GCCGCCGAGG TCCGCATCGC GTTCACCCGC
AACGGCGGCC AGCTGGCCGA CCCCGGGTCC GTCTCCTACC TGTTCTCCCG CAAGGGCGTC
GTCATCGTGC CCAAGGACGG CACCGACGAG GACTCGGTCC TCGAGGCCGT CCTCGAGGCC
GGTGGCGAAG AGGTCAACGA CCTCGGCGAG TCCTTCGAGG TGCTCTCCGA GGCCACGGAC
CTCGTCGCGG TCCGCACCGC GCTCCAGGAG GCCGGCATCG AGTACGACTC GGCCGACGTC
GTCTTCCACC CCTCGATGCA GGTCGAGGTC GACGCCGAGG GCGCCCGCAA GGCGCTCCGC
CTCGTCGACG CCCTCGAGGA CTCCGACGAC GTGCAGAACG TCTTCGCCAA CTTCGACGCC
TCCGACGAGG TCATGGCGGA GCTCGAGAAC GACGACTGA
 
Protein sequence
MSGHSKWATT KHKKAVIDAK RGKLFAKLIK NIEVAARTGG GDINGNPTLF DAVQKAKKTS 
VPNDNIERAL KRGSGQEAGG ADYQTIMYEG YGPGGIAFLV ECLTDNKNRA AAEVRIAFTR
NGGQLADPGS VSYLFSRKGV VIVPKDGTDE DSVLEAVLEA GGEEVNDLGE SFEVLSEATD
LVAVRTALQE AGIEYDSADV VFHPSMQVEV DAEGARKALR LVDALEDSDD VQNVFANFDA
SDEVMAELEN DD