Gene Sked_17430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17430 
Symbol 
ID8633379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1943931 
End bp1944578 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID 
ProductCDP-diacylglycerol inositol 3-phosphatidyltransferase 
Protein accessionYP_003314504 
Protein GI269795049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0943717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGCC GCCTGAGGGG CCTCATGGGC CGCCTCTTCC ACCCCCTCGC GAAGGCGCTG 
CTCGCCGCGA AGGTCTCACC CGACGCGGTG ACCGTCTTCG GGACCGTCGG GGTGCTCGTC
ACCGCGCTCT GGGCCTTCCC GACCGACCAC CTCGTCGCAG GAGCGGTGAT CATCGGGCTC
TTCGCCTTCC TAGACTCCCT CGACGGGACC ATGGCCCGCC TGGCGGGGCG CTCGGGCAGC
TGGGGCGCGT TCCTCGACTC GACGCTCGAC CGGCTCGCCG ACGCCGCGAT CTTCTGCGGT
CTCGCCGCGT ACTTCCTGCT GCACCACGAC GGCCCGACCC GCGTCTGGGG CGCCGCGGCA
GCGATCGCCT GCCTCGTCGT CGGATCGATG GTCTCCTATG CCCGGGCACG AGCCGAAGGG
CTCGGGATGA CCGCGGACGT CGGGATCGCC GAGCGCGCCG AACGCCTCGT GGTGTCCCTC
GTGGCCGCCG GCGTCGTCGG GCTCGGCCTG CCCGTCGTCG TGCTCGTCGT CGCCCTCGTG
GTGCTCGCCC TCGCGAGCGT CGTCACCGTC GGCCAGCGGG TCGCGACGGT CCATCGCCAG
GCGCTGGCCG CGACGGCCGC CGAGCCGTCC ACGACGGTCG AGGGCTGA
 
Protein sequence
MLSRLRGLMG RLFHPLAKAL LAAKVSPDAV TVFGTVGVLV TALWAFPTDH LVAGAVIIGL 
FAFLDSLDGT MARLAGRSGS WGAFLDSTLD RLADAAIFCG LAAYFLLHHD GPTRVWGAAA
AIACLVVGSM VSYARARAEG LGMTADVGIA ERAERLVVSL VAAGVVGLGL PVVVLVVALV
VLALASVVTV GQRVATVHRQ ALAATAAEPS TTVEG